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AT5G08370.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28818374 (2017): extracellular region plant-type cell wall
  • PMID:28155257 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25852701 (2015): extracellular region apoplast
  • PMID:22363647 (2012): extracellular region apoplast
  • PMID:16287169 (2006): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha-galactosidase 2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha-galactosidase 2 (AGAL2); FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: positive regulation of flower development, leaf morphogenesis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, family 27 (InterPro:IPR002241), Glycoside hydrolase, clan GH-D (InterPro:IPR000111), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-galactosidase 1 (TAIR:AT5G08380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G08370-MONOMERBioCyc:ARA:GQT-1861-MONOMERCAZy:GH27EC:3.2.1.22
eggNOG:ENOG410XPF1eggNOG:KOG2366EMBL:AK317201EMBL:AL392174
EMBL:AY085529EMBL:AY090238EMBL:BT000619EMBL:CP002688
EnsemblPlants:AT5G08370EnsemblPlants:AT5G08370.1EnsemblPlants:AT5G08370.2entrez:830735
ExpressionAtlas:Q8RX86Gene3D:2.60.40.1180Gene3D:3.20.20.70GeneID:830735
Genevisible:Q8RX86GO:GO:0005975GO:GO:0009505GO:GO:0009620
GO:GO:0009911GO:GO:0009965GO:GO:0048046GO:GO:0052692
GO:GO:0071555gramene_pathway:3.2.1.22gramene_pathway:PWY0-1301hmmpanther:PTHR11452
hmmpanther:PTHR11452:SF33HOGENOM:HOG000161224InterPro:IPR000111InterPro:IPR002241
InterPro:IPR013780InterPro:IPR013785InterPro:IPR017853iPTMnet:Q8RX86
KEGG:00052+3.2.1.22KEGG:00561+3.2.1.22KEGG:00600+3.2.1.22KEGG:00603+3.2.1.22
KEGG:ath:AT5G08370KO:K07407OMA:MGNSWRTPaxDb:Q8RX86
Pfam:PF16499Pfam:Q8RX86PhylomeDB:Q8RX86PRIDE:Q8RX86
PRINTS:PR00740PRO:PR:Q8RX86PROSITE:PS00512ProteinModelPortal:Q8RX86
Proteomes:UP000006548Reactome:R-ATH-1660662RefSeq:NP_001031855.1RefSeq:NP_568193.1
scanprosite:PS00512SMR:Q8RX86STRING:3702.AT5G08370.1SUPFAM:SSF51011
SUPFAM:SSF51445TAIR:AT5G08370tair10-symbols:AGAL2tair10-symbols:AtAGAL2
UniGene:At.32587UniGene:At.48997UniProt:Q8RX86
Coordinates (TAIR10) chr5:-:2691116..2693441
Molecular Weight (calculated) 44039.40 Da
IEP (calculated) 7.73
GRAVY (calculated) -0.32
Length 396 amino acids
Sequence (TAIR10)
(BLAST)
001: MVLLSFSLRF IAFTLTITLT QIADGFQSRM LMNNGLALSP QMGWNSWNHF QCNINETLIK QTADAMVSSG LSAIGYKYIN IDDCWGELKR DSQGSLVAKA
101: STFPSGIKAL SDYVHSKGLK LGIYSDAGTL TCSQTMPGSL GHEEQDAKTF ASWGIDYLKY DNCENTGTSP RERYPKMSKA LLNSGRSIFF SLCEWGQEDP
201: ATWAGDIGNS WRTTGDIQDN WKSMTLIADQ NDRWASYARP GSWNDPDMLE VGNGGMTKEE YMSHFSIWAL AKAPLLIGCD LRSMDKVTFE LLSNKEVIAV
301: NQDKLGIQGK KVKKEGDLEV WAGPLSKKRV AVILWNRGSA SANITARWAE IGLNSSDIVN ARDLWEHSTY SCVKKQLSAL VEPHACKMYT LTRRKA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)