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AT5G08120.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.587
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24134884 (2013): cytoskeleton microtubules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : movement protein binding protein 2C
Curator
Summary (TAIR10)
Microtubule-associated and viral movement protein binding protein. Negatively regulates KN1 association to plasmodesmata and, consequently, cell-to-cell transport. Involved in the alignment of cortical microtubules, the patterning of stomata and in restricting tobamoviral infections.
Computational
Description (TAIR10)
movement protein binding protein 2C (MPB2C); Has 5726 Blast hits to 4344 proteins in 670 species: Archae - 77; Bacteria - 646; Metazoa - 3260; Fungi - 443; Plants - 256; Viruses - 12; Other Eukaryotes - 1032 (source: NCBI BLink).
Protein Annotations
DNASU:830707eggNOG:ENOG410IK57eggNOG:ENOG410XZR4EMBL:AF370224EMBL:AL357612EMBL:AY117260EMBL:CP002688
EnsemblPlants:AT5G08120EnsemblPlants:AT5G08120.1entrez:830707GeneID:830707GO:GO:0009414GO:GO:0010375GO:GO:0010497
GO:GO:0015630GO:GO:0043622GO:GO:0051607Gramene:AT5G08120.1hmmpanther:PTHR35502hmmpanther:PTHR35502:SF2HOGENOM:HOG000005955
KEGG:ath:AT5G08120ncoils:CoilOMA:GNENLDRPhylomeDB:Q9LEZ4PIR:T50497Proteomes:UP000006548RefSeq:NP_196429.1
STRING:3702.AT5G08120.1TAIR:AT5G08120tair10-symbols:MPB2CUniGene:At.22525UniProt:Q9LEZ4
Coordinates (TAIR10) chr5:-:2600743..2602678
Molecular Weight (calculated) 37350.70 Da
IEP (calculated) 4.71
GRAVY (calculated) -0.95
Length 326 amino acids
Sequence (TAIR10)
(BLAST)
001: MYEQQQHFMD LQSDSGFGDD SSWLAGDDDL RLSPHQSAAG TNSGNENLDR RLLKDLVEMV PLIEHYMEHK ERSSFKRRGS MIYTKMPSKE SLSRRGRNAS
101: QTVPGRKKRD QEGNDDVMNN SREDDENAKA LAGAEKEEMS RLREQVNDLQ TKLSEKEEVL KSMEMSKNQV NEIQEKLEAT NRLVAEKDML IKSMQLQLSD
201: TKIKLADKQA ALEKTQWEAK TTGTRAIKLQ EQLDAVEGDI STFTRVFETL AKTDSKKPDR DYDAVPYEFD HLPYLDDVDE TDLRKMEEAR LAYVAAVNTA
301: KEREDEESLV MAAQARAYLQ SLAFTY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)