AT5G08090.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.836 What is SUBAcon? |
|
||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||
| Description (TAIR10) | protein_coding : | ||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||
| Computational Description (TAIR10) |
unknown protein; Has 13 Blast hits to 13 proteins in 8 species: Archae - 0; Bacteria - 4; Metazoa - 6; Fungi - 2; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||
| Protein Annotations |
|
||||||||||||||||
| Coordinates (TAIR10) | chr5:+:2591711..2592899 | ||||||||||||||||
| Molecular Weight (calculated) | 35958.20 Da | ||||||||||||||||
| IEP (calculated) | 4.77 | ||||||||||||||||
| GRAVY (calculated) | 0.74 | ||||||||||||||||
| Length | 322 amino acids | ||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSGKGFEEDN QTLEILRLAL GWTKSEIYVL TMHWLIVGVE MYLFWPLYPN FPHVWGDSVM GMVMIQYVTG VISYASMSHP LTALTFSHIA TRYVYLYSIY 101: ITSSVAYILF LIVAEVEDNV SVDWISHMLG LLALAFLVAI VSVEFAIGFG SFTSLVCFWY IVKHFKEKET LDPSLAPISS SSEKLNLVIL MALGGAIVFV 201: QIGLAMGLEQ TKLSPIYFGF SFASYVFFRF IEVLEGNITV KSISAHISRC AGILSLCFFV GLISQEFAIG IFVSTLVLLL LYLCKSWCKS WLTNPTAQDL 301: ADEVQTLLQF EDIPHSSGGE IV |
||||||||||||||||
| See Also |
|
||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)