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AT5G08060.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27943495 (2017): mitochondrion
  • PMID:27122571 (2016): mitochondrion
  • PMID:23761796 (2013): mitochondrion
  • PMID:22923678 (2012): mitochondrion
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:21472856 (2011): mitochondrion
  • PMID:14671022 (2004): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; Has 42 Blast hits to 42 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J4A5eggNOG:ENOG410XWMYEMBL:AF370243EMBL:AK118633EMBL:AL133421EMBL:AY062967EMBL:CP002688
EnsemblPlants:AT5G08060EnsemblPlants:AT5G08060.1entrez:830700GeneID:830700GO:GO:0005739Gramene:AT5G08060.1hmmpanther:PTHR36391
hmmpanther:PTHR36391:SF1KEGG:ath:AT5G08060OMA:DIKYYPRPhylomeDB:Q9SD78PIR:T45631Proteomes:UP000006548RefSeq:NP_196423.1
STRING:3702.AT5G08060.1SwissPalm:Q9SD78TAIR:AT5G08060UniGene:At.639UniProt:Q9SD78
Coordinates (TAIR10) chr5:+:2580588..2580983
Molecular Weight (calculated) 15038.90 Da
IEP (calculated) 8.64
GRAVY (calculated) -0.71
Length 131 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKSVSTAAS SLVQNLRRYI KKPWQITGPC AHPEYLEAVP KATEYRLRCP ATIDEEAIVP SSDPETVYNI VYHGRDQRRN RPPIRRYVLT KDNVVQMMNE
101: KKSFDVSDFP KVYLTTTVEE DLDTRGGGYE K
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)