AT5G07830.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : glucuronidase 2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-β-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be membrane-associated. | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
glucuronidase 2 (GUS2); FUNCTIONS IN: beta-glucuronidase activity; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 1 (TAIR:AT5G61250.1); Has 380 Blast hits to 370 proteins in 68 species: Archae - 0; Bacteria - 29; Metazoa - 190; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:2504168..2506567 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 60253.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.20 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.14 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 543 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGFRVCVIVV FLGCLLLVPE KTMAQEMKRA SIVIQGARRV CETDENFVCA TLDWWPHDKC NYDQCPWGYS SVINMDLTRP LLTKAIKAFK PLRIRIGGSL 101: QDQVIYDVGN LKTPCRPFQK MNSGLFGFSK GCLHMKRWDE LNSFLTATGA VVTFGLNALR GRHKLRGKAW GGAWDHINTQ DFLNYTVSKG YVIDSWEFGN 201: ELSGSGVGAS VSAELYGKDL IVLKDVINKV YKNSWLHKPI LVAPGGFYEQ QWYTKLLEIS GPSVVDVVTH HIYNLGSGND PALVKKIMDP SYLSQVSKTF 301: KDVNQTIQEH GPWASPWVGE SGGAYNSGGR HVSDTFIDSF WYLDQLGMSA RHNTKVYCRQ TLVGGFYGLL EKGTFVPNPD YYSALLWHRL MGKGVLAVQT 401: DGPPQLRVYA HCSKGRAGVT LLLINLSNQS DFTVSVSNGI NVVLNAESRK KKSLLDTLKR PFSWIGSKAS DGYLNREEYH LTPENGVLRS KTMVLNGKSL 501: KPTATGDIPS LEPVLRSVNS PLNVLPLSMS FIVLPNFDAS ACS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)