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AT5G06950.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : bZIP transcription factor family protein
Curator
Summary (TAIR10)
Transcription factor of the B-ZIP family that has high affinity for C-box motifs. Interacts with NPR1 and may regulate PR gene expression. Phosphorylated by a CK2-like protein in vitro. Phosphorylation is enhanced by salicylic acid treatment.
Computational
Description (TAIR10)
AHBP-1B; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 6 (TAIR:AT3G12250.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IH9ZeggNOG:ENOG410YSUAEMBL:EF470787EMBL:EF470788EMBL:EF470789EMBL:EF470790EMBL:EF470791
EMBL:EF470792EMBL:EF470793EMBL:EF470794EMBL:EF470795EMBL:EF470797EMBL:EF470798EMBL:EF470799
EMBL:EF470800EMBL:EF470803EMBL:EF470804EMBL:EF470805EMBL:EF470806EnsemblPlants:AT5G06950EnsemblPlants:AT5G06950.1
EnsemblPlants:AT5G06950.2EnsemblPlants:AT5G06950.3EnsemblPlants:AT5G06950.4entrez:830586ExpressionAtlas:B2BDR5GeneID:830586GO:GO:0003700
GO:GO:0006351GO:GO:0043565Gramene:AT5G06950.1Gramene:AT5G06950.2Gramene:AT5G06950.3Gramene:AT5G06950.4hmmpanther:PTHR22952
hmmpanther:PTHR22952:SF206InterPro:IPR004827InterPro:IPR025422KEGG:ath:AT5G06950KO:K14431ncoils:CoilOMA:SANVAIY
Pfam:P43273Pfam:PF00170Pfam:PF14144Pfscan:PS50217PhylomeDB:B2BDR5PROSITE:PS00036PROSITE:PS50217
RefSeq:NP_001031845.1RefSeq:NP_001078539.1RefSeq:NP_196312.1RefSeq:NP_974744.1scanprosite:PS00036SMART:SM00338SMR:B2BDR5
STRING:3702.AT5G06950.1SUPFAM:SSF57959TAIR:AT5G06950tair10-symbols:AHBP-1Btair10-symbols:TGA2UniGene:At.23884UniProt:B2BDR5
UniProt:P43273
Coordinates (TAIR10) chr5:+:2152323..2154174
Molecular Weight (calculated) 36686.50 Da
IEP (calculated) 9.01
GRAVY (calculated) -0.58
Length 330 amino acids
Sequence (TAIR10)
(BLAST)
001: MADTSPRTDV STDDDTDHPD LGSEGALVNT AASDSSDRSK GKMDQKTLRR LAQNREAARK SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGVFISGTG
101: DQAHSTGGNG ALAFDAEHSR WLEEKNKQMN ELRSALNAHA GDSELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQLMGINNL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSGNVA SYMGQMAMAM GKLGTLEGFI RQADNLRLQT LQQMIRVLTT
301: RQSARALLAI HDYFSRLRAL SSLWLARPRE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)