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AT5G06900.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.937
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 93, subfamily D, polypeptide 1
Curator
Summary (TAIR10)
member of CYP93D
Computational
Description (TAIR10)
cytochrome P450, family 93, subfamily D, polypeptide 1 (CYP93D1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 712, subfamily A, polypeptide 1 (TAIR:AT2G42250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G06900-MONOMEReggNOG:COG2124eggNOG:KOG0156EMBL:AB010697
EMBL:CP002688EnsemblPlants:AT5G06900EnsemblPlants:AT5G06900.1entrez:830580
Gene3D:1.10.630.10GeneID:830580GO:GO:0005506GO:GO:0016020
GO:GO:0016021GO:GO:0016709GO:GO:0020037GO:GO:0044550
Gramene:AT5G06900.1hmmpanther:PTHR24298hmmpanther:PTHR24298:SF129HOGENOM:HOG000218628
InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972KEGG:ath:AT5G06900
ncoils:CoilOMA:KFMKRICPfam:PF00067PhylomeDB:Q9FL56
PRINTS:PR00385PRINTS:PR00463PROSITE:PS00086Proteomes:UP000006548
RefSeq:NP_196307.1scanprosite:PS00086SMR:Q9FL56STRING:3702.AT5G06900.1
SUPFAM:SSF48264TAIR:AT5G06900tair10-symbols:CYP93D1TMHMM:TMhelix
UniGene:At.54754UniProt:Q9FL56
Coordinates (TAIR10) chr5:-:2136160..2137925
Molecular Weight (calculated) 57483.20 Da
IEP (calculated) 6.34
GRAVY (calculated) -0.10
Length 507 amino acids
Sequence (TAIR10)
(BLAST)
001: MVDLQYFSVI ILVCLGITVL IQAITNRLRD RLPLPPSPTA LPIIGHIHLL GPIAHQALHK LSIRYGPLMY LFIGSIPNLI VSSAEMANEI LKSNELNFLN
101: RPTMQNVDYL TYGSADFFSA PYGLHWKFMK RICMVELFSS RALDSFVSVR SEELKKLLIR VLKKAEAEES VNLGEQLKEL TSNIITRMMF RKMQSDSDGG
201: EKSEEVIKMV VELNELAGFF NVSETFWFLK RLDLQGLKKR LKNARDKYDV IIERIMEEHE SSKKNATGER NMLDVLLDIY EDKNAEMKLT RENIKAFIMN
301: IYGGGTDTSA ITVEWALAEL INHPEIMKKA QQEIEQVVGN KRVVEESDLC NLSYTQAVVK ETMRLHPGGP IFVRESDEEC AVAGFRIPAK TRVIVNVWAI
401: GRDSNQWEDP LEFRPERFEG SEWKVMSEKM MSFGAGRRSC PGEKMVFRFV PIILAAIIQC FELKVKGSVD MDEGTGSSLP RATPLVCVPV AKEATQSFSL
501: LEPNVNF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)