(Prediction and Experimental)
What is SUBAcon?
What is ASURE?
|Experimental Localisations and PPI||
|Description (TAIR10)||protein_coding : Late Embryogenesis Abundant 4-5|
|Encodes LEA4-5, a member of the Late Embryogenesis Abundant (LEA) proteins which typically accumulate in response to low water availability conditions imposed during development or by the environment. Most of thediverse set of LEA proteins can be grouped according to properties such as high hydrophilicity and high content of glycine or other small amino acids in what has been termed hydrophilins. LEA4-5 protects enzyme activities from the adverse effects induced by freeze-thaw cycles in vitro.|
|Late Embryogenesis Abundant 4-5 (LEA4-5); CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 1 (InterPro:IPR005513); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).|
|Molecular Weight (calculated)||16179.90 Da|
|Length||158 amino acids|
001: MQSMKETASN IAASAKSGMD KTKATLEEKA EKMKTRDPVQ KQMATQVKED KINQAEMQKR ETRQHNAAMK EAAGAGTGLG LGTATHSTTG QVGHGTGTHQ
101: MSALPGHGTG QLTDRVVEGT AVTDPIGRNT GTGRTTAHNT HVGGGGATGY GTGGGYTG
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)