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AT5G06760.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Late Embryogenesis Abundant 4-5
Curator
Summary (TAIR10)
Encodes LEA4-5, a member of the Late Embryogenesis Abundant (LEA) proteins which typically accumulate in response to low water availability conditions imposed during development or by the environment. Most of thediverse set of LEA proteins can be grouped according to properties such as high hydrophilicity and high content of glycine or other small amino acids in what has been termed hydrophilins. LEA4-5 protects enzyme activities from the adverse effects induced by freeze-thaw cycles in vitro.
Computational
Description (TAIR10)
Late Embryogenesis Abundant 4-5 (LEA4-5); CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 1 (InterPro:IPR005513); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J2GIeggNOG:ENOG410YTH0EMBL:AP002032EMBL:AY050936EMBL:AY091171EMBL:CP002688EnsemblPlants:AT5G06760
EnsemblPlants:AT5G06760.1entrez:830565GeneID:830565GO:GO:0005829GO:GO:0006970GO:GO:0009409GO:GO:0009414
GO:GO:0009790GO:GO:0048316Gramene:AT5G06760.1hmmpanther:PTHR33493hmmpanther:PTHR33493:SF2InterPro:IPR005513KEGG:ath:AT5G06760
ncoils:CoilOMA:ANAGMQKPfam:PF03760PhylomeDB:Q9FG31ProDom:PD005538Proteomes:UP000006548RefSeq:NP_196294.1
STRING:3702.AT5G06760.1TAIR:AT5G06760tair10-symbols:LEA4-5UniGene:At.48991UniProt:Q9FG31
Coordinates (TAIR10) chr5:-:2089754..2090313
Molecular Weight (calculated) 16179.90 Da
IEP (calculated) 10.10
GRAVY (calculated) -0.81
Length 158 amino acids
Sequence (TAIR10)
(BLAST)
001: MQSMKETASN IAASAKSGMD KTKATLEEKA EKMKTRDPVQ KQMATQVKED KINQAEMQKR ETRQHNAAMK EAAGAGTGLG LGTATHSTTG QVGHGTGTHQ
101: MSALPGHGTG QLTDRVVEGT AVTDPIGRNT GTGRTTAHNT HVGGGGATGY GTGGGYTG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)