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AT5G05930.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.941
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : guanylyl cyclase 1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
guanylyl cyclase 1 (GC1); CONTAINS InterPro DOMAIN/s: Guanylyl cyclase (InterPro:IPR018616); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-606-MONOMEReggNOG:ENOG4111HS3eggNOG:KOG4621EMBL:AK229272
EMBL:AY118140EMBL:BT024499EMBL:CP002688EnsemblPlants:AT5G05930
EnsemblPlants:AT5G05930.1entrez:830478ExpressionAtlas:Q8L870GeneID:830478
Gramene:AT5G05930.1hmmpanther:PTHR31400HOGENOM:HOG000015782InterPro:IPR018616
KEGG:ath:AT5G05930OMA:HEYFTQTPfam:PF09778PhylomeDB:Q8L870
Proteomes:UP000006548RefSeq:NP_568159.1STRING:3702.AT5G05930.1TAIR:AT5G05930
tair10-symbols:ATGC1tair10-symbols:GC1UniGene:At.32932UniProt:Q8L870
Coordinates (TAIR10) chr5:-:1780270..1782659
Molecular Weight (calculated) 30915.80 Da
IEP (calculated) 4.65
GRAVY (calculated) -0.06
Length 274 amino acids
Sequence (TAIR10)
(BLAST)
001: MWPLCFLLNK LLRVEERNQG ILDGNGDSTF PKYCLFDDPL VSDGKYRDAG LPSSSHMDVP HVHQLASWDC GLACVLMVLR ASGIASCTLE DLAEICSTNS
101: IWTVDLAYLL QKFCVEFSYY TITFGANPNY SIEEFYKEQL PEDLVRVDLL FRKAHESGII IQCRSVSIHE ISCLLLSGNY IAIALVDQDK LSKSWLEEVL
201: VSGLHSSNSC YTGHYVVICG YDAVRDEFEI RDPASSKIHE RISSKCLENA RKSFGTDEDL LLINLENMRN QNGY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)