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AT5G05890.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plasma membrane 0.983
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : UDP-Glycosyltransferase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G05880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
CAZy:GT1eggNOG:COG1819eggNOG:KOG1192EMBL:KJ138701
EnsemblPlants:AT5G05890EnsemblPlants:AT5G05890.1entrez:830474ExpressionAtlas:W8PV16
GeneID:830474Genevisible:Q9FI97GO:GO:0016758Gramene:AT5G05890.1
hmmpanther:PTHR11926hmmpanther:PTHR11926:SF369InterPro:IPR002213KEGG:ath:AT5G05890
OMA:WSSTVESPANTHER:PTHR11926PaxDb:W8PV16Pfam:PF00201
Pfam:Q9FI97PhylomeDB:W8PV16ProteinModelPortal:W8PV16RefSeq:NP_196208.1
SMR:W8PV16SUPFAM:SSF53756UniGene:At.32937UniProt:Q9FI97
UniProt:W8PV16
Coordinates (TAIR10) chr5:+:1772567..1774012
Molecular Weight (calculated) 51740.40 Da
IEP (calculated) 5.16
GRAVY (calculated) -0.14
Length 455 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKSNGLRVI LFPLPLQGCI NPMIQLAKIL HSRGFSITVI HTCFNAPKAS SHPLFTFLEI PDGLSETEKR TNNTKLLLTL LNRNCESPFR ECLSKLLQSA
101: DSETGEEKQR ISCLIADSGW MFTQPIAQSL KLPILVLSVF TVSFFRCQFV LPKLRREVYL PLQDSEQEDL VQEFPPLRKK DIVRILDVET DILDPFLDKV
201: LQMTKASSGL IFMSCEELDH DSVSQAREDF KIPIFGIGPS HSHFPATSSS LSTPDETCIP WLDKQEDKSV IYVSYGSIVT ISESDLIEIA WGLRNSDQPF
301: LLVVRVGSVR GREWIETIPE EIMEKLNEKG KIVKWAPQQD VLKHRAIGGF LTHNGWSSTV ESVCEAVPMI CLPFRWDQML NARFVSDVWM VGINLEDRVE
401: RNEIEGAIRR LLVEPEGEAI RERIEHLKEK VGRSFQQNGS AYQSLQNLID YISSF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)