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AT5G05880.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.677
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : UDP-Glycosyltransferase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G05900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
CAZy:GT1eggNOG:COG1819eggNOG:KOG1192EMBL:KJ676987EnsemblPlants:AT5G05880EnsemblPlants:AT5G05880.1entrez:830473
ExpressionAtlas:A0A068FHS2GeneID:830473GO:GO:0016758Gramene:AT5G05880.1hmmpanther:PTHR11926hmmpanther:PTHR11926:SF369InterPro:IPR002213
KEGG:ath:AT5G05880ncoils:CoilOMA:DVVKHIRPANTHER:PTHR11926PaxDb:A0A068FHS2Pfam:PF00201Pfam:Q9FI98
PhylomeDB:A0A068FHS2PRIDE:Q9FI98ProteinModelPortal:A0A068FHS2RefSeq:NP_196207.1SUPFAM:SSF53756UniGene:At.54735UniProt:A0A068FHS2
UniProt:Q9FI98
Coordinates (TAIR10) chr5:+:1769648..1771515
Molecular Weight (calculated) 51629.30 Da
IEP (calculated) 6.67
GRAVY (calculated) -0.20
Length 451 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKSNGLRVI LFPLPLQGCI NPMIQLAKIL HSRGFSITVI HTCFNAPKAS SHPLFTFIQI QDGLSETETR TRDVKLLITL LNQNCESPVR ECLRKLLQSA
101: KEEKQRISCL INDSGWIFTQ HLAKSLNLMR LAFNTYKISF FRSHFVLPQL RREMFLPLQD SEQDDPVEKF PPLRKKDLLR ILEADSVQGD SYSDMILEKT
201: KASSGLIFMS CEELDQDSLS QSREDFKVPI FAIGPSHSHF PASSSSLFTP DETCIPWLDR QEDKSVIYVS IGSLVTINET ELMEIAWGLS NSDQPFLWVV
301: RVGSVNGTEW IEAIPEYFIK RLNEKGKIVK WAPQQEVLKH RAIGGFLTHN GWNSTVESVC EGVPMICLPF RWDQLLNARF VSDVWMVGIH LEGRIERDEI
401: ERAIRRLLLE TEGEAIRERI QLLKEKVGRS VKQNGSAYQS LQNLINYISS F
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)