AT5G05870.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.931 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : UDP-glucosyl transferase 76C1 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
UDP-glucosyl transferase 76C1 (UGT76C1); FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G05880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr5:+:1767683..1769177 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 52363.40 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.02 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 464 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEKRNERQVI LFPLPLQGCI NPMLQLAKIL YSRGFSITII HTRFNAPKSS DHPLFTFLQI RDGLSESQTQ SRDLLLQLTL LNNNCQIPFR ECLAKLIKPS 101: SDSGTEDRKI SCVIDDSGWV FTQSVAESFN LPRFVLCAYK FSFFLGHFLV PQIRREGFLP VPDSEADDLV PEFPPLRKKD LSRIMGTSAQ SKPLDAYLLK 201: ILDATKPASG IIVMSCKELD HDSLAESNKV FSIPIFPIGP FHIHDVPASS SSLLEPDQSC IPWLDMRETR SVVYVSLGSI ASLNESDFLE IACGLRNTNQ 301: SFLWVVRPGS VHGRDWIESL PSGFMESLDG KGKIVRWAPQ LDVLAHRATG GFLTHNGWNS TLESICEGVP MICLPCKWDQ FVNARFISEV WRVGIHLEGR 401: IERREIERAV IRLMVESKGE EIRGRIKVLR DEVRRSVKQG GSSYRSLDEL VDRISIIIEP LVPT |
||||||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)