AT5G05480.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A (InterPro:IPR021102); BEST Arabidopsis thaliana protein match is: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein (TAIR:AT3G14920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:1622338..1624164 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 68438.50 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.27 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.32 | ||||||||||||||||||||||||||||
| Length | 608 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPENQNGAVK FFFTLAFLTA TAVSRPSSPD RFLRSASTCL RSPVEPQEYE ELRRPLPSDQ LTPSCSHVLF RHSFANTINR PPFTTPYTPP SSCISPPWSY 101: VVLDLRAASS GDQYDRISGL WLGGVELLRT STAEPSPSGI FWNVRKDVSR YSSLFMRSDL NVTMMLENIV NDVYTGIYHI NVTLIFYEFN PIASNLKISN 201: RLGFVDSQKR DQTPADLIIP VCDGGNRGFW FMIENPRETY SKGIQIPSNT RQIVLELYVS FHGNDEFWYS NPPNSYIRTN NLTTGRGNGA YREVFVKIDG 301: RYVGSEVPFP VIFTGGINPL FWEPVVAIGA FNLPSYDMDL TPFLGLLLDG KSHEFAFGVN DGISYWLVDA NLHLWLDHGS SNVEAGSRLY DSPSRHMMRQ 401: EQLEQLDGSF KVEAEVSSEY DGWVRSSKGN LTTMVKSMFK VDSLVRFEKN GTYKRVEQRV KTERIVEVTS ESGKPVNRVV HQRTYPLTVI TSTLRGLTND 501: KDTYMLVTNV SHALNETHSD GEALIQVYSR QDSEGWMEVE DHNVLAGEAS TKQSLSYIDE FSCYSRTIVA ANGEIAQDSS SDSCTSSSFS ELNTIEQLII 601: TNVMKHLS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)