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AT5G05410.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : DRE-binding protein 2A
Curator
Summary (TAIR10)
Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein contains one AP2 domain. Overexpression of transcriptional activation domain of DREB2A resulted in significant drought stress tolerance but only slight freezing tolerance in transgenic Arabidopsis plants. Microarray and RNA gel blot analyses revealed that DREB2A regulates expression of many water stress–inducible genes.
Computational
Description (TAIR10)
DRE-binding protein 2A (DREB2A); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: DRE/CRT-binding protein 2B (TAIR:AT3G11020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioGrid:15703DIP:DIP-40571NeggNOG:ENOG410IXVHeggNOG:ENOG410YKCQEMBL:AB007790EMBL:AB010692EMBL:AB016570
EMBL:AY063972EMBL:AY691903EMBL:CP002688EnsemblPlants:AT5G05410EnsemblPlants:AT5G05410.1entrez:830424ExpressionAtlas:O82132
Gene3D:3.30.730.10GeneID:830424Genevisible:O82132GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0009408
GO:GO:0009414GO:GO:0010224GO:GO:0010286GO:GO:0042542GO:GO:0043565GO:GO:0044212GO:GO:0045893
hmmpanther:PTHR31241hmmpanther:PTHR31241:SF2HOGENOM:HOG000015215InParanoid:O82132IntAct:O82132InterPro:IPR001471InterPro:IPR016177
OMA:EVCTVETPaxDb:O82132Pfam:O82132Pfam:PF00847Pfscan:PS51032PhylomeDB:O82132PIR:T51833
PRIDE:O82132PRINTS:PR00367PRO:PR:O82132PROSITE:PS51032ProteinModelPortal:O82132Proteomes:UP000006548RefSeq:NP_196160.1
SMART:SM00380SMR:O82132STRING:3702.AT5G05410.1SUPFAM:SSF54171TAIR:AT5G05410tair10-symbols:DREB2tair10-symbols:DREB2A
UniGene:At.25247UniProt:O82132
Coordinates (TAIR10) chr5:+:1602650..1603657
Molecular Weight (calculated) 37704.40 Da
IEP (calculated) 4.93
GRAVY (calculated) -0.99
Length 335 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVYDQSGDR NRTQIDTSRK RKSRSRGDGT TVAERLKRWK EYNETVEEVS TKKRKVPAKG SKKGCMKGKG GPENSRCSFR GVRQRIWGKW VAEIREPNRG
101: SRLWLGTFPT AQEAASAYDE AAKAMYGPLA RLNFPRSDAS EVTSTSSQSE VCTVETPGCV HVKTEDPDCE SKPFSGGVEP MYCLENGAEE MKRGVKADKH
201: WLSEFEHNYW SDILKEKEKQ KEQGIVETCQ QQQQDSLSVA DYGWPNDVDQ SHLDSSDMFD VDELLRDLNG DDVFAGLNQD RYPGNSVANG SYRPESQQSG
301: FDPLQSLNYG IPPFQLEGKD GNGFFDDLSY LDLEN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)