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AT5G05370.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cytochrome b-c1 complex, subunit 8 protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cytochrome b-c1 complex, subunit 8 protein; CONTAINS InterPro DOMAIN/s: Cytochrome b-c1 complex, subunit 8 (InterPro:IPR020101); BEST Arabidopsis thaliana protein match is: Cytochrome b-c1 complex, subunit 8 protein (TAIR:AT3G10860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
DNASU:830419eggNOG:ENOG410J0B9eggNOG:ENOG410XZ33EMBL:AB010692EMBL:BT010476EMBL:CP002688EnsemblPlants:AT5G05370
EnsemblPlants:AT5G05370.1entrez:830419Gene3D:1.20.5.210GeneID:830419GO:GO:0005750GO:GO:0008121GO:GO:0022900
Gramene:AT5G05370.1hmmpanther:PTHR34559HOGENOM:HOG000005723InterPro:IPR004205InterPro:IPR020101KEGG:ath:AT5G05370OMA:ENYRENE
Pfam:PF10890PhylomeDB:Q9FLB7ProDom:PD056240Proteomes:UP000006548RefSeq:NP_196156.1SMR:Q9FLB7STRING:3702.AT5G05370.1
SUPFAM:SSF81508TAIR:AT5G05370UniGene:At.33005UniGene:At.339UniGene:At.67825UniProt:Q9FLB7
Coordinates (TAIR10) chr5:-:1590977..1591869
Molecular Weight (calculated) 8418.37 Da
IEP (calculated) 10.01
GRAVY (calculated) -0.25
Length 72 amino acids
Sequence (TAIR10)
(BLAST)
1: MGKQPVKLKA VVYALSPFQQ KIMTGLWKDL PEKIHHKVSE NWISTILLVA PVVGTYSYAQ YFKEQEKLEH RF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)