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AT5G05320.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.524
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : FAD/NAD(P)-binding oxidoreductase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT4G38540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0654eggNOG:KOG2614EMBL:AB010692EMBL:AK227657
EMBL:BT003148EMBL:CP002688EnsemblPlants:AT5G05320EnsemblPlants:AT5G05320.1
entrez:830414Gene3D:3.50.50.60GeneID:830414GO:GO:0004497
GO:GO:0071949Gramene:AT5G05320.1hmmpanther:PTHR13789hmmpanther:PTHR13789:SF185
HOGENOM:HOG000239066InterPro:IPR002938InterPro:IPR023753KEGG:ath:AT5G05320
OMA:GTKMKQYPfam:PF01494PhylomeDB:Q9FLC2Proteomes:UP000006548
RefSeq:NP_196151.1SMR:Q9FLC2STRING:3702.AT5G05320.1SUPFAM:SSF51905
TAIR:AT5G05320UniGene:At.28668UniProt:Q9FLC2
Coordinates (TAIR10) chr5:-:1575093..1576679
Molecular Weight (calculated) 45609.20 Da
IEP (calculated) 9.30
GRAVY (calculated) -0.22
Length 406 amino acids
Sequence (TAIR10)
(BLAST)
001: MEAESTQDII IVGAGISGLA TALGLHRLGI RSIVLESSEQ LRATGFALSL YFNAWKAMEA LGISQHIRSL GDRFQGWVVR PISAGDPPKE MLFPESEEYE
101: VRCVQRKLLL DALAGELPQG TIRFSSKLVH IELSGHYKMV HLSDGTILKT KVLVGCDGVK SVVGKWLGFK NPVKTSRVAI RGIAHFQTGH ELGRRFFQFY
201: GNGVRSGFIS CDQNTVYWFL THTSTDLDKK NHQKIKQFVL TKIKDLPDNI KSILETTDLD SLVMNPLMYR PPWELLWANI AKDNVCVAGD ALHPMTPDIG
301: QGGCSAMEDG VILARCLGEA MKAKNMKGET EDENESYRRI EDGLKKYAGS RKWRSIDLIT TSYTVGFIQQ SRGKWMTLFR DKFMSSFLSW LRVKKSHFNC
401: GRLSHE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)