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AT5G05310.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.987
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : TLC ATP/ADP transporter
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
TLC ATP/ADP transporter; Has 570 Blast hits to 566 proteins in 118 species: Archae - 0; Bacteria - 205; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 318 (source: NCBI BLink).
Protein Annotations
eggNOG:COG3202eggNOG:ENOG410IKWMEMBL:CP002688EnsemblPlants:AT5G05310EnsemblPlants:AT5G05310.1entrez:830413ExpressionAtlas:F4JZA2
GeneID:830413GO:GO:0005471GO:GO:0005524GO:GO:0016021Gramene:AT5G05310.1hmmpanther:PTHR31187hmmpanther:PTHR31187:SF0
InterPro:IPR004667PANTHER:PTHR31187PaxDb:F4JZA2PRIDE:F4JZA2ProteinModelPortal:F4JZA2Proteomes:UP000006548RefSeq:NP_850771.1
TAIR:AT5G05310TMHMM:TMhelixUniGene:At.43781UniProt:F4JZA2
Coordinates (TAIR10) chr5:+:1571271..1574164
Molecular Weight (calculated) 50576.00 Da
IEP (calculated) 9.82
GRAVY (calculated) 0.64
Length 469 amino acids
Sequence (TAIR10)
(BLAST)
001: MAARIRLDAV ISTIVTVHPH ELPALLHSSS CFFFILSAYF VVLPLRDEGA ISLGLSKLPG LFVGSLFLTL IAAPLSTFIF SLPNLSKSKA LVIIHRFFSL
101: SLVLCFLLWM ASPTESNSKD AVEAASGLTN DGANAATGWD NHGWFYISVR VGFFLWVALL NLVAISSTWA RIIDVMDIQS GARLFGFVGA GATLGQLFGS
201: VFAAATAWMG PYLLLFAALL MEFAAQSSKG ITNDISQSSE ELSPLRGTDN DHQRERKQEA TSPKVGSPKV ASPKSPISTT RPQFWAILDG MRLILASPYL
301: LLVSLFLWLG AVISSFFYFQ KVNIIATTIK SSIGRRRLFA QINSFVAVFI LIGQLTLTGR ILTVAGVTVA ISASPFVALG NLVAIAIWPT WVTVAVSETL
401: RKVTTYVVTR PGRELLFTVV SQDEKYKAKV CIDVIVQRLG DAAAAGLFEV LTIALGGQTS TASLYALPV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)