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AT5G05170.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25122472 (2014): Golgi Golgi apparatus
  • PMID:23990937 (2013): plasma membrane
  • PMID:22923678 (2012): Golgi
  • PMID:22430844 (2012): Golgi
  • PMID:21826108 (2012): Golgi trans-Golgi network multivesicular body
  • PMID:21433285 (2011): plasma membrane
  • PMID:20843791 (2010): plasma membrane
  • PMID:20374526 (2010): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:18686298 (2008): plant-type vacuole plant-type vacuole membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:16618929 (2006): Golgi
  • PMID:15308754 (2004): plasma membrane
  • PMID:14506206 (2003): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Cellulose synthase family protein
Curator
Summary (TAIR10)
Encodes a cellulose synthase isomer. CESA3 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA3, along with CESA1 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.
Computational
Description (TAIR10)
CONSTITUTIVE EXPRESSION OF VSP 1 (CEV1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: primary cell wall biogenesis, cellulose biosynthetic process, defense response; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 1 (TAIR:AT4G32410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:MONOMER-2362BioGrid:15678BRENDA:2.4.1.12CAZy:GT2DIP:DIP-46437NEC:2.4.1.12eggNOG:COG1215
eggNOG:ENOG410II8IEMBL:AB018111EMBL:AF027174EMBL:AK230097EMBL:AY045960EMBL:BT002335EMBL:CP002688
EnsemblPlants:AT5G05170EnsemblPlants:AT5G05170.1entrez:830399ExpressionAtlas:Q941L0Gene3D:3.30.40.10GeneID:830399Genevisible:Q941L0
GO:GO:0005768GO:GO:0005794GO:GO:0005802GO:GO:0005886GO:GO:0006952GO:GO:0008270GO:GO:0009506
GO:GO:0009833GO:GO:0009834GO:GO:0016021GO:GO:0016760GO:GO:0030244GO:GO:0071555Gramene:AT5G05170.1
gramene_pathway:2.4.1.12gramene_pathway:PWY-1001gramene_plant_reactome:1119314gramene_plant_reactome:6875373hmmpanther:PTHR13301hmmpanther:PTHR13301:SF64HOGENOM:HOG000241942
InParanoid:Q941L0IntAct:Q941L0InterPro:IPR001841InterPro:IPR005150InterPro:IPR013083InterPro:IPR027934InterPro:IPR029044
iPTMnet:Q941L0KEGG:00500+2.4.1.12KEGG:ath:AT5G05170KO:K10999ncoils:CoilOMA:QKKPGYFPaxDb:Q941L0
Pfam:PF03552Pfam:PF14569Pfam:Q941L0Pfscan:PS50089PhylomeDB:Q941L0PIR:T52054PRIDE:Q941L0
PRO:PR:Q941L0PROSITE:PS50089ProteinModelPortal:Q941L0Proteomes:UP000006548RefSeq:NP_196136.1SMR:Q941L0STRING:3702.AT5G05170.1
SUPFAM:SSF53448SUPFAM:SSF57850SwissPalm:Q941L0TAIR:AT5G05170tair10-symbols:ATCESA3tair10-symbols:ATH-Btair10-symbols:CESA3
tair10-symbols:CEV1tair10-symbols:IXR1TCDB:4.D.3.1.4TMHMM:TMhelixUniGene:At.24338UniPathway:UPA00695UniProt:Q941L0
UniProt:W8Q6G0
Coordinates (TAIR10) chr5:-:1530401..1535090
Molecular Weight (calculated) 119689.00 Da
IEP (calculated) 7.61
GRAVY (calculated) -0.18
Length 1065 amino acids
Sequence (TAIR10)
(BLAST)
0001: MESEGETAGK PMKNIVPQTC QICSDNVGKT VDGDRFVACD ICSFPVCRPC YEYERKDGNQ SCPQCKTRYK RLKGSPAIPG DKDEDGLADE GTVEFNYPQK
0101: EKISERMLGW HLTRGKGEEM GEPQYDKEVS HNHLPRLTSR QDTSGEFSAA SPERLSVSST IAGGKRLPYS SDVNQSPNRR IVDPVGLGNV AWKERVDGWK
0201: MKQEKNTGPV STQAASERGG VDIDASTDIL ADEALLNDEA RQPLSRKVSI PSSRINPYRM VIMLRLVILC LFLHYRITNP VPNAFALWLV SVICEIWFAL
0301: SWILDQFPKW FPVNRETYLD RLALRYDREG EPSQLAAVDI FVSTVDPLKE PPLVTANTVL SILAVDYPVD KVSCYVSDDG AAMLSFESLA ETSEFARKWV
0401: PFCKKYSIEP RAPEWYFAAK IDYLKDKVQT SFVKDRRAMK REYEEFKIRI NALVSKALKC PEEGWVMQDG TPWPGNNTRD HPGMIQVFLG QNGGLDAEGN
0501: ELPRLVYVSR EKRPGFQHHK KAGAMNALVR VSAVLTNGPF ILNLDCDHYI NNSKALREAM CFLMDPNLGK QVCYVQFPQR FDGIDKNDRY ANRNTVFFDI
0601: NLRGLDGIQG PVYVGTGCVF NRTALYGYEP PIKVKHKKPS LLSKLCGGSR KKNSKAKKES DKKKSGRHTD STVPVFNLDD IEEGVEGAGF DDEKALLMSQ
0701: MSLEKRFGQS AVFVASTLME NGGVPPSATP ENLLKEAIHV ISCGYEDKSD WGMEIGWIYG SVTEDILTGF KMHARGWRSI YCMPKLPAFK GSAPINLSDR
0801: LNQVLRWALG SVEILFSRHC PIWYGYNGRL KFLERFAYVN TTIYPITSIP LLMYCTLPAV CLFTNQFIIP QISNIASIWF LSLFLSIFAT GILEMRWSGV
0901: GIDEWWRNEQ FWVIGGVSAH LFAVFQGILK VLAGIDTNFT VTSKASDEDG DFAELYLFKW TTLLIPPTTL LIVNLVGVVA GVSYAINSGY QSWGPLFGKL
1001: FFAFWVIVHL YPFLKGLMGR QNRTPTIVVV WSVLLASIFS LLWVRIDPFT SRVTGPDILE CGINC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)