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AT5G05160.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.500
plasma membrane 0.500
ASURE: extracellular,plasma membrane
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:21433285 (2011): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:16356755 (2006): extracellular region
  • PMID:15593128 (2005): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G58300.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G05160-MONOMEREC:2.7.11.-eggNOG:COG0515eggNOG:ENOG410JVMIEMBL:AB018111EMBL:CP002688EMBL:FJ708769
EnsemblPlants:AT5G05160EnsemblPlants:AT5G05160.1entrez:830398Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:830398Genevisible:Q9FHK7
GO:GO:0004674GO:GO:0005524GO:GO:0005618GO:GO:0005886GO:GO:0016021GO:GO:2000605Gramene:AT5G05160.1
hmmpanther:PTHR27008hmmpanther:PTHR27008:SF6HOGENOM:HOG000116554InParanoid:Q9FHK7InterPro:IPR000719InterPro:IPR001611InterPro:IPR008271
InterPro:IPR011009InterPro:IPR013210InterPro:IPR013320InterPro:IPR017441InterPro:IPR032675iPTMnet:Q9FHK7KEGG:ath:AT5G05160
OMA:RTIGYNAPaxDb:Q9FHK7Pfam:PF00069Pfam:PF08263Pfam:PF13855Pfam:Q9FHK7Pfscan:PS50011
PhylomeDB:Q9FHK7PRIDE:Q9FHK7PRO:PR:Q9FHK7PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q9FHK7
Proteomes:UP000006548RefSeq:NP_196135.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:Q9FHK7STRING:3702.AT5G05160.1
SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT5G05160TMHMM:TMhelixUniGene:At.28178UniProt:Q9FHK7
Coordinates (TAIR10) chr5:+:1528000..1530017
Molecular Weight (calculated) 70567.90 Da
IEP (calculated) 6.89
GRAVY (calculated) -0.10
Length 640 amino acids
Sequence (TAIR10)
(BLAST)
001: MNSSHTAFVA ASFFFLLLAA TAVLVSADLA SDEQALLNFA ASVPHPPKLN WNKNLSLCSS WIGITCDESN PTSRVVAVRL PGVGLYGSIP PATLGKLDAL
101: KVLSLRSNSL FGTLPSDILS LPSLEYLYLQ HNNFSGELTT NSLPSISKQL VVLDLSYNSL SGNIPSGLRN LSQITVLYLQ NNSFDGPIDS LDLPSVKVVN
201: LSYNNLSGPI PEHLKKSPEY SFIGNSLLCG PPLNACSGGA ISPSSNLPRP LTENLHPVRR RQSKAYIIAI VVGCSVAVLF LGIVFLVCLV KKTKKEEGGG
301: EGVRTQMGGV NSKKPQDFGS GVQDPEKNKL FFFERCNHNF DLEDLLKASA EVLGKGSFGT AYKAVLEDTT AVVVKRLREV VASKKEFEQQ MEIVGKINQH
401: SNFVPLLAYY YSKDEKLLVY KYMTKGSLFG IMHGNRGDRG VDWETRMKIA TGTSKAISYL HSLKFVHGDI KSSNILLTED LEPCLSDTSL VTLFNLPTHT
501: PRTIGYNAPE VIETRRVSQR SDVYSFGVVI LEMLTGKTPL TQPGLEDERV VIDLPRWVRS VVREEWTAEV FDVELLKFQN IEEEMVQMLQ LALACVARNP
601: ESRPKMEEVA RMIEDVRRLD QSQQLQQNRT SSEATSNVSE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)