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AT5G04910.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.991
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 71 Blast hits to 71 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IW7HeggNOG:ENOG4111SMCEMBL:CP002688EMBL:DQ446917EnsemblPlants:AT5G04910EnsemblPlants:AT5G04910.1entrez:830373
GeneID:830373Gramene:AT5G04910.1hmmpanther:PTHR28309KEGG:ath:AT5G04910ncoils:CoilOMA:HLHEITEPfam:PF14966
PhylomeDB:Q1PE01Proteomes:UP000006548RefSeq:NP_196111.2STRING:3702.AT5G04910.1TAIR:AT5G04910UniGene:At.54724UniProt:Q1PE01
Coordinates (TAIR10) chr5:+:1437695..1438770
Molecular Weight (calculated) 24565.80 Da
IEP (calculated) 4.52
GRAVY (calculated) -0.45
Length 222 amino acids
Sequence (TAIR10)
(BLAST)
001: MSAEDFQKKV SLRDSLSGDI ENECGGSGVG STSSTVGSGV ASQTLVLLRS LLEIQQRRAQ AYANLKSGFS EYVESGAEAL YQKLCSEITT EFSECSKQVR
101: EMESLFLNPE VGRADLAKLL SDIQTQEKQK LHLTVTIQVL KKAGRPSERM LTHENCKFKK PMQHECVHLH EITEAAGTEE AEADAEFDNA LKEAIRGVQD
201: AVTSINEYLE DIRYEIEALE AD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)