AT5G04670.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Enhancer of polycomb-like transcription factor protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Enhancer of polycomb-like transcription factor protein; CONTAINS InterPro DOMAIN/s: Enhancer of polycomb-like (InterPro:IPR019542); BEST Arabidopsis thaliana protein match is: Enhancer of polycomb-like transcription factor protein (TAIR:AT4G32620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:1337998..1340884 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 87759.20 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.11 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.55 | ||||||||||||||||||||||||||||||||
| Length | 766 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPSVGMRRTT RVFGVVKAAD GARVLRSGRR IWPNVGEPKV RRAHDVVDRD CDSVLKNQNK SKGNKVSSGK SNSQPCSPKQ VSSEKEDKVD DFPVTKRRKV 101: RNEGVGDEKT VDKMFGIVYS RKRKRLCEPS SSDRSEEPLR SLKFYRRRRK LSQRVSSVLT LTVDWSCEDC WFLTVFGLAM RYIRREELRL SSLASFFLSQ 201: PINQVFADHG VRFLVRSPLS SRGVCKFFGA MSCLPLFSAD FAVIPRWFMD MHFTLFVRVL PRSFFFVEKS LYLLNNPIEE SDSESELALP EPCTPRNGVV 301: VGLHPSVRAS KLTGGNAQYR GNLGSHSFQK RRSSLRRRRA RNLSHNAHKL NNGTPVFDIS GSRKNRTAAV SSKKLRSSVL SNSSPVSNGI SIIPMTKTKE 401: ELDSICCSAN ILMIHSDRCT REEGFSVMLE ASSSKEWFLV IKKDGAIRYS HMAQRTMRPF SSNRITHATV WMGGDNWKLE FCDRQDWLGF KDIYKECYER 501: NLLEQSVKVI PIPGVREVCG YAEYIDNFPS FSRPPVSYIS VNEDEVSRAM ARSIALYDMD SEDEEWLERQ NQKMLNEEDD QYLQLQREAF ELMIDGFEKY 601: HFHSPADDLL DEKAATIGSI SYLGRQEVVE AVHDYWLKKR KQRKAPLLRI FQGHQVKKTQ LLSKPVFRKR RSFKRQGSQL HGKAKQTSPW MVAVKAAEPE 701: EEDDILRMEE AKVLADKTME TAIAKRRRAQ ILAENADLAV YKAMRALRIA EAIKEAESRE VDTTVV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)