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AT5G04590.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : sulfite reductase
Curator
Summary (TAIR10)
A.thaliana gene encoding sulfite reductase.
Computational
Description (TAIR10)
sulfite reductase (SIR); FUNCTIONS IN: sulfite reductase activity, sulfite reductase (ferredoxin) activity, copper ion binding; INVOLVED IN: sulfate reduction, response to salt stress, response to cold; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sulphite reductase, ferredoxin dependent (InterPro:IPR011787), Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: nitrite reductase 1 (TAIR:AT2G15620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:AT5G04590-MONOMERBioGrid:15615EC:1.8.7.1eggNOG:COG0155eggNOG:KOG0560EMBL:AF325027EMBL:AK229873
EMBL:AL162875EMBL:AY048290EMBL:BT000593EMBL:CP002688EMBL:Y10157EMBL:Z49217EnsemblPlants:AT5G04590
EnsemblPlants:AT5G04590.1entrez:830336Gene3D:3.90.480.10GeneID:830336Genevisible:Q9LZ66GO:GO:0003677GO:GO:0005507
GO:GO:0006275GO:GO:0006323GO:GO:0006790GO:GO:0009409GO:GO:0009507GO:GO:0009536GO:GO:0009570
GO:GO:0009651GO:GO:0009941GO:GO:0010319GO:GO:0016002GO:GO:0016020GO:GO:0019424GO:GO:0020037
GO:GO:0042644GO:GO:0045892GO:GO:0048046GO:GO:0050311GO:GO:0051539Gramene:AT5G04590.1hmmpanther:PTHR11493
hmmpanther:PTHR11493:SF48HOGENOM:HOG000218417InParanoid:Q9LZ66InterPro:IPR005117InterPro:IPR006066InterPro:IPR006067InterPro:IPR011787
KEGG:00920+1.8.1.2KEGG:ath:AT5G04590KO:K00392OMA:MGMTHGDPaxDb:Q9LZ66Pfam:PF01077Pfam:PF03460
Pfam:Q9LZ66PhylomeDB:Q9LZ66PIR:S71437PIR:T48455PRIDE:Q9LZ66PRINTS:PR00397PRO:PR:Q9LZ66
PROSITE:PS00365ProteinModelPortal:Q9LZ66Proteomes:UP000006548RefSeq:NP_196079.1scanprosite:PS00365SMR:Q9LZ66STRING:3702.AT5G04590.1
SUPFAM:SSF55124SUPFAM:SSF56014SwissPalm:Q9LZ66TAIR:AT5G04590tair10-symbols:SIRTIGRfam:TIGR02042TIGRFAMs:TIGR02042
UniGene:At.25240unipathway:UPA00140UniProt:Q9LZ66
Coordinates (TAIR10) chr5:+:1319404..1322298
Molecular Weight (calculated) 71954.10 Da
IEP (calculated) 8.47
GRAVY (calculated) -0.38
Length 642 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSTFRAPAG AATVFTADQK IRLGRLDALR SSHSVFLGRY GRGGVPVPPS ASSSSSSPIQ AVSTPAKPET ATKRSKVEII KEKSNFIRYP LNEELLTEAP
101: NVNESAVQLI KFHGSYQQYN REERGGRSYS FMLRTKNPSG KVPNQLYLTM DDLADEFGIG TLRLTTRQTF QLHGVLKQNL KTVMSSIIKN MGSTLGACGD
201: LNRNVLAPAA PYVKKDYLFA QETADNIAAL LSPQSGFYYD MWVDGEQFMT AEPPEVVKAR NDNSHGTNFV DSPEPIYGTQ FLPRKFKVAV TVPTDNSVDL
301: LTNDIGVVVV SDENGEPQGF NIYVGGGMGR THRMESTFAR LAEPIGYVPK EDILYAVKAI VVTQREHGRR DDRKYSRMKY LISSWGIEKF RDVVEQYYGK
401: KFEPSRELPE WEFKSYLGWH EQGDGAWFCG LHVDSGRVGG IMKKTLREVI EKYKIDVRIT PNQNIVLCDI KTEWKRPITT VLAQAGLLQP EFVDPLNQTA
501: MACPAFPLCP LAITEAERGI PSILKRVRAM FEKVGLDYDE SVVIRVTGCP NGCARPYMAE LGLVGDGPNS YQVWLGGTPN LTQIARSFMD KVKVHDLEKV
601: CEPLFYHWKL ERQTKESFGE YTTRMGFEKL KELIDTYKGV SQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)