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AT5G04120.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphoglycerate mutase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G50520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G04120-MONOMERBioGrid:15570EC:3.1.3.3eggNOG:COG0406
eggNOG:ENOG410IUDBEMBL:AK117579EMBL:AL391716EMBL:CP002688
EnsemblPlants:AT5G04120EnsemblPlants:AT5G04120.1entrez:830290Gene3D:3.40.50.1240
GeneID:830290Genevisible:F4KI56GO:GO:0004647GO:GO:0006564
GO:GO:0016311GO:GO:0070179Gramene:AT5G04120.1HOGENOM:HOG000221683
InParanoid:F4KI56InterPro:IPR001345InterPro:IPR013078InterPro:IPR029033
KEGG:ath:AT5G04120KO:K15634OMA:KDTALMIPaxDb:F4KI56
Pfam:F4KI56Pfam:PF00300PRIDE:F4KI56PRO:PR:F4KI56
PROSITE:PS00175ProteinModelPortal:F4KI56Proteomes:UP000006548RefSeq:NP_196032.1
scanprosite:PS00175SMART:SM00855SMR:F4KI56STRING:3702.AT5G04120.1
SUPFAM:SSF53254TAIR:AT5G04120UniGene:At.33173UniProt:F4KI56
Coordinates (TAIR10) chr5:+:1120091..1121605
Molecular Weight (calculated) 26475.30 Da
IEP (calculated) 5.08
GRAVY (calculated) -0.37
Length 238 amino acids
Sequence (TAIR10)
(BLAST)
001: MGHEWIDAER EFKWSEDVKV ESEVTEIVLV RHGETTWNAA GRIQGQIESD LNEVGLKQAV AIAERLGKEE RPVAVYSSDL KRAKDTALMI AKTCFCPEVI
101: EVPDLKERHV GSLQGLYWKE GAEKEPEAYS AFFSSQNDLE IPGGGESFDQ LADRSMDALE QIAKKHKGER VIVVTHGGVL RAIYLRITQA SSAGKLLNAS
201: VNVVHLRDQK WIIDSWSDVS HLSSVGFLQR GFDGDAKP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)