AT5G03770.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : KDO transferase A | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a putative KDO (3-deoxy-D-manno-octulosonate) transferase | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
KDO transferase A (KDTA); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, carbohydrate metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal (InterPro:IPR007507); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:995191..997622 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 49891.40 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.96 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.11 | ||||||||||||||||||||||||||||||||
| Length | 447 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKLGVFVYRL YRALTYGVSP LIHLHIRWRR LRGLEHFSRW PERFGHPSAV RPPGSLIWFH AVSLGEGMAA IPVIRHCNEV KSDLTILMTT TTVSAFEVIK 101: NQLPVGVLHQ FAPLDTPLAI DRFLGHWKPN AIIIMENELW PNLIMAASGL LIPLGLLNAR MSTKSFKRWS SPLLLPLVSL LLSKFSLIAP LSTLQGIRFQ 201: LLHAPPFVIN YSGDLKYVVN KFHVSSGTSE SIRDLKVELA EMKVWIASSL HRGEEEVILG VHNMLLESHP DSVVIIVPRH PHHGQQIAHK LRKDGQSVAL 301: RSQNEKLTPR KTNIYVVDTL GELRELYSVA PIAVIGGSFI PGLTGHNLSE AAAAGCAVIT GCHVGHFSHM VKAMQQANPL SVTQVSTKLE LKEAVDLLLS 401: NPEILETHQR ASKDVYESLS SCIITNIWKL LNLHIFRGKS RNHIECK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)