suba logo
AT5G03490.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
plasma membrane 0.493
golgi 0.383
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : UDP-Glycosyltransferase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G51210.1); Has 6070 Blast hits to 5962 proteins in 306 species: Archae - 0; Bacteria - 104; Metazoa - 824; Fungi - 18; Plants - 5054; Viruses - 30; Other Eukaryotes - 40 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1819eggNOG:KOG1192EMBL:KJ138710EnsemblPlants:AT5G03490EnsemblPlants:AT5G03490.1entrez:831823ExpressionAtlas:W8Q2V9
GeneID:831823GO:GO:0016758Gramene:AT5G03490.1hmmpanther:PTHR11926hmmpanther:PTHR11926:SF379InterPro:IPR002213KEGG:ath:AT5G03490
OMA:GWTHDLCPANTHER:PTHR11926PaxDb:W8Q2V9Pfam:PF00201Pfam:Q9LZD8PhylomeDB:W8Q2V9ProteinModelPortal:W8Q2V9
RefSeq:NP_195969.1SMR:W8Q2V9STRING:3702.AT5G03490.1SUPFAM:SSF53756UniGene:At.50423UniProt:Q9LZD8UniProt:W8Q2V9
Coordinates (TAIR10) chr5:+:871550..872947
Molecular Weight (calculated) 50945.40 Da
IEP (calculated) 5.74
GRAVY (calculated) 0.07
Length 465 amino acids
Sequence (TAIR10)
(BLAST)
001: MTEVLLLPGT KSENSKPPHI VVFPFPAQGH LLPLLDLTHQ LCLRGFNVSV IVTPGNLTYL SPLLSAHPSS VTSVVFPFPP HPSLSPGVEN VKDVGNSGNL
101: PIMASLRQLR EPIINWFQSH PNPPIALISD FFLGWTHDLC NQIGIPRFAF FSISFFLVSV LQFCFENIDL IKSTDPIHLL DLPRAPIFKE EHLPSIVRRS
201: LQTPSPDLES IKDFSMNLLS YGSVFNSSEI LEDDYLQYVK QRMGHDRVYV IGPLCSIGSG LKSNSGSVDP SLLSWLDGSP NGSVLYVCFG SQKALTKDQC
301: DALALGLEKS MTRFVWVVKK DPIPDGFEDR VSGRGLVVRG WVSQLAVLRH VAVGGFLSHC GWNSVLEGIT SGAVILGWPM EADQFVNARL LVEHLGVAVR
401: VCEGGETVPD SDELGRVIAE TMGEGGREVA ARAEEIRRKT EAAVTEANGS SVENVQRLVK EFEKV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)