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AT5G03320.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.964
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:22318864 (2012): plasma membrane
  • PMID:18686298 (2008): plant-type vacuole plant-type vacuole membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G09830.2); Has 109980 Blast hits to 108978 proteins in 3984 species: Archae - 79; Bacteria - 12272; Metazoa - 40540; Fungi - 9373; Plants - 31986; Viruses - 364; Other Eukaryotes - 15366 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G03320-MONOMEReggNOG:COG0515eggNOG:KOG1187EMBL:AB005240EMBL:AL162751EMBL:BT028916EMBL:CP002688
EnsemblPlants:AT5G03320EnsemblPlants:AT5G03320.1entrez:831876GeneID:831876GO:GO:0004672GO:GO:0005524Gramene:AT5G03320.1
hmmpanther:PTHR27001hmmpanther:PTHR27001:SF29HOGENOM:HOG000116550InterPro:IPR000719InterPro:IPR001245InterPro:IPR011009InterPro:IPR017441
KEGG:ath:AT5G03320OMA:HCAEDDEPfam:PF07714Pfscan:PS50011PhylomeDB:Q9LZF8PIR:T48353PROSITE:PS00107
PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_195952.1scanprosite:PS00107SMR:Q9LZF8STRING:3702.AT5G03320.1SUPFAM:SSF56112
TAIR:AT5G03320UniGene:At.1601UniProt:Q9LZF8
Coordinates (TAIR10) chr5:+:802759..804242
Molecular Weight (calculated) 47008.30 Da
IEP (calculated) 9.82
GRAVY (calculated) -0.51
Length 420 amino acids
Sequence (TAIR10)
(BLAST)
001: MKCFLFPLGD KKDEQRSPKP VSPTSNFSDV NKSGSDFSPR DVSGTSTVSS TGRNSNTSMS ARENNLREFT IGDLKSATRN FSRSGMIGEG GFGCVFWGTI
101: KNLEDPSKKI EVAVKQLGKR GLQGHKEWVT EVNFLGVVEH SNLVKLLGHC AEDDERGIQR LLVYEYMPNQ SVEFHLSPRS PTVLTWDLRL RIAQDAARGL
201: TYLHEEMDFQ IIFRDFKSSN ILLDENWTAK LSDFGLARLG PSPGSSHVST DVVGTMGYAA PEYIQTGRLT SKSDVWGYGV FIYELITGRR PLDRNKPKGE
301: QKLLEWVRPY LSDTRRFRLI VDPRLEGKYM IKSVQKLAVV ANLCLTRNAK ARPKMSEVLE MVTKIVEASS PGNGGKKPQL VPLKSQETSR VEEGKNKKVL
401: DGAEGGWLEK LWNPKNVRAC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)