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AT5G03260.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : laccase 11
Curator
Summary (TAIR10)
putative laccase, a member of laccase family of genes (17 members in Arabidopsis).
Computational
Description (TAIR10)
laccase 11 (LAC11); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Laccase/Diphenol oxidase family protein (TAIR:AT2G38080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G03260-MONOMERBioGrid:17163EC:1.10.3.2eggNOG:COG2132
eggNOG:KOG1263EMBL:AB005240EMBL:AK229950EMBL:AL163002
EMBL:AY065128EMBL:AY081592EMBL:CP002688EnsemblPlants:AT5G03260
EnsemblPlants:AT5G03260.1entrez:831887Gene3D:2.60.40.420GeneID:831887
Genevisible:Q8VZA1GO:GO:0005507GO:GO:0009809GO:GO:0016722
GO:GO:0046274GO:GO:0048046GO:GO:0052716Gramene:AT5G03260.1
hmmpanther:PTHR11709hmmpanther:PTHR11709:SF116HOGENOM:HOG000241916InParanoid:Q8VZA1
InterPro:IPR001117InterPro:IPR002355InterPro:IPR008972InterPro:IPR011706
InterPro:IPR011707InterPro:IPR017761InterPro:IPR033138KEGG:ath:AT5G03260
KO:K05909OMA:FPDRPPKPaxDb:Q8VZA1Pfam:PF00394
Pfam:PF07731Pfam:PF07732Pfam:Q8VZA1PhylomeDB:Q8VZA1
PIR:T48347PRIDE:Q8VZA1PRO:PR:Q8VZA1PROSITE:PS00079
PROSITE:PS00080ProteinModelPortal:Q8VZA1Proteomes:UP000006548RefSeq:NP_195946.2
scanprosite:PS00079scanprosite:PS00080SMR:Q8VZA1STRING:3702.AT5G03260.1
SUPFAM:SSF49503TAIR:AT5G03260tair10-symbols:LAC11TIGRfam:TIGR03389
TIGRFAMs:TIGR03389UniGene:At.23614UniGene:At.54702UniProt:Q8VZA1
Coordinates (TAIR10) chr5:-:777198..779338
Molecular Weight (calculated) 61751.60 Da
IEP (calculated) 8.90
GRAVY (calculated) -0.07
Length 557 amino acids
Sequence (TAIR10)
(BLAST)
001: MKMGFLFLFC YLLAFLGYSP VDAAVKKYQF DVQVKNISRI CNAKPIVTVN GMFPGPTVYA REGDRVIINV TNHVQYNMSI HWHGLKQYRN GWADGPAYIT
101: QCPIQTGQSY LYDFNVTGQR GTLWWHAHIL WLRATVYGAI VILPAPGKPY PFPQPYQESN IILGEWWNKD VETAVNQANQ LGAPPPMSDA HTINGKPGPL
201: FPCSEKHTFV IEAEAGKTYL LRIINAALND ELFFGIAGHN MTVVEIDAVY TKPFTTKAIL LGPGQTTNVL VKTDRSPNRY FMAASPFMDA PVSVDNKTVT
301: AILQYKGVPN TVLPILPKLP LPNDTSFALD YNGKLKSLNT PNFPALVPLK VDRRLFYTIG LGINACPTCV NGTNLAASIN NITFIMPKTA LLKAHYSNIS
401: GVFRTDFPDR PPKAFNYTGV PLTANLGTST GTRLSRVKFN TTIELVLQDT NLLTVESHPF HLHGYNFFVV GTGVGNFDPK KDPAKFNLVD PPERNTVGVP
501: TGGWAAIRFR ADNPGVWFMH CHLEVHTMWG LKMAFVVENG ETPELSVLPP PKDYPSC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)