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AT5G03120.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 14 Blast hits to 14 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J6PAeggNOG:ENOG411195BEMBL:AF386956EMBL:AL163002EMBL:AY072521EMBL:CP002688EnsemblPlants:AT5G03120
EnsemblPlants:AT5G03120.1entrez:831807GeneID:831807Gramene:AT5G03120.1KEGG:ath:AT5G03120OMA:FAKGSEQPhylomeDB:Q9LYX3
PIR:T48333Proteomes:UP000006548RefSeq:NP_195932.1STRING:3702.AT5G03120.1TAIR:AT5G03120TMHMM:TMhelixUniGene:At.4998
UniProt:Q9LYX3
Coordinates (TAIR10) chr5:+:734062..734683
Molecular Weight (calculated) 8354.07 Da
IEP (calculated) 7.07
GRAVY (calculated) -0.29
Length 76 amino acids
Sequence (TAIR10)
(BLAST)
1: MKSTVMMIFL IIYLLIAVPC FAKGSEQTDS EVYEIDYRGP ETHNSRPPPE TMHGKPPYIH HNTSAAGLGA HVGGKN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)