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AT5G02160.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J1I2eggNOG:ENOG4111VYFEMBL:AF325034EMBL:AK118635EMBL:BT021140EMBL:CP002688EnsemblPlants:AT5G02160
EnsemblPlants:AT5G02160.1entrez:831910Gene3D:2.10.230.10GeneID:831910GO:GO:0009535GO:GO:0016021Gramene:AT5G02160.1
hmmpanther:PTHR36389hmmpanther:PTHR36389:SF1HOGENOM:HOG000241159InterPro:IPR001305KEGG:ath:AT5G02160OMA:AQIVCPNPhylomeDB:Q9FPH2
Proteomes:UP000006548RefSeq:NP_195836.5STRING:3702.AT5G02160.1TAIR:AT5G02160TMHMM:TMhelixUniGene:At.25262UniProt:Q9FPH2
Coordinates (TAIR10) chr5:+:426392..427024
Molecular Weight (calculated) 13379.10 Da
IEP (calculated) 10.13
GRAVY (calculated) 0.12
Length 129 amino acids
Sequence (TAIR10)
(BLAST)
001: MTIAPALQTT FVSSTNFLKH SSSWGSPSPN NVILPKNKRS SSSVVVAAVG DVSSDGTIYL IGGAIAVALV GTAFPILFKR KDTCPECDGA GFVRKGGVTL
101: RANAARKDLP QIVCANCNGL GKLNQIDKS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)