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AT5G02150.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Fes1C
Curator
Summary (TAIR10)
Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150).
Computational
Description (TAIR10)
Fes1C (Fes1C); FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1A (TAIR:AT3G09350.1); Has 582 Blast hits to 579 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 194; Fungi - 149; Plants - 170; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410Y90BeggNOG:KOG2160EMBL:AK118831EMBL:AL162508EMBL:BT005554EMBL:CP002688EnsemblPlants:AT5G02150
EnsemblPlants:AT5G02150.1entrez:831805ExpressionAtlas:Q9LZL7Gene3D:1.25.10.10GeneID:831805Gramene:AT5G02150.1hmmpanther:PTHR19316
hmmpanther:PTHR19316:SF17HOGENOM:HOG000239951IntAct:Q9LZL7InterPro:IPR011989InterPro:IPR013918InterPro:IPR016024OMA:SNANIRA
Pfam:PF08609PhylomeDB:Q9LZL7PIR:T48236Proteomes:UP000006548RefSeq:NP_195835.1SMR:Q9LZL7STRING:3702.AT5G02150.1
SUPFAM:SSF48371TAIR:AT5G02150tair10-symbols:Fes1CUniGene:At.33454UniProt:Q9LZL7
Coordinates (TAIR10) chr5:-:424481..426068
Molecular Weight (calculated) 36143.00 Da
IEP (calculated) 5.14
GRAVY (calculated) -0.35
Length 324 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKDGPNWDG LLKWSLSHSD GTRPTCQLSE EDRKWFAEAM QSQTVDVVKR LKEITQVLQT PQQVLEAHEV TPQDIEGLLD ELQEHVESID MANDLHSVGG
101: LVPLLGYLKN SNANIRAKSA DVVSTIVENN PRSQESVMEA NGLESLLLRF TSDTDMHSRT QALGAISSLI RNNKPGITGF RIANGYSGLK DALETDSVRF
201: QRKALNLLHY LLQENDSDSD IAIEFGLHHL MMHLVSSFDA DVREAALRGL LELVKARKDC STCGSSIVKG DERLRQILKD RIKAISRVKA MSLFMSQEDL
301: SAAKEERQLL DSLWTTIFNE PSSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)