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AT5G01910.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.991
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 66 Blast hits to 66 proteins in 27 species: Archae - 0; Bacteria - 2; Metazoa - 18; Fungi - 7; Plants - 29; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JN9YeggNOG:ENOG41119XEEMBL:CP002688EMBL:DQ446912EnsemblPlants:AT5G01910EnsemblPlants:AT5G01910.1entrez:831775
ExpressionAtlas:Q1PE06GeneID:831775Gramene:AT5G01910.1hmmpanther:PTHR36790ncoils:CoilPhylomeDB:Q1PE06Proteomes:UP000006548
RefSeq:NP_195811.2STRING:3702.AT5G01910.1TAIR:AT5G01910UniGene:At.51399UniProt:Q1PE06
Coordinates (TAIR10) chr5:-:357950..358655
Molecular Weight (calculated) 20819.80 Da
IEP (calculated) 6.31
GRAVY (calculated) -0.88
Length 180 amino acids
Sequence (TAIR10)
(BLAST)
001: MKCSGRKALQ PRNIYQTPKE DAFFVKPKAA EKLKENLNLE TSIDASLAEE LSAFKKKLER LREDRESTEK LLKERDEAMD LHMSHLLQRG ETQKSLEIQV
101: DRLFRLKELH AYSSKISPIR SLRAKEQQEK MRRFTFAGEE QPDEESSVEI ANGPIEEESS TKSNVLERDM IIANTQPIIS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)