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AT5G01470.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.552
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410II8AeggNOG:ENOG4111H6SEMBL:AY086411EMBL:BT025168
EMBL:CP002688EnsemblPlants:AT5G01470EnsemblPlants:AT5G01470.1entrez:831788
ExpressionAtlas:Q8LCT7Gene3D:3.40.50.150GeneID:831788GO:GO:0008168
Gramene:AT5G01470.1hmmpanther:PTHR14614hmmpanther:PTHR14614:SF42HOGENOM:HOG000015197
InterPro:IPR019410InterPro:IPR029063Pfam:PF10294PhylomeDB:Q8LCT7
Proteomes:UP000006548RefSeq:NP_568090.1SUPFAM:SSF53335TAIR:AT5G01470
UniGene:At.33550UniProt:Q8LCT7
Coordinates (TAIR10) chr5:+:190953..192462
Molecular Weight (calculated) 27562.80 Da
IEP (calculated) 4.89
GRAVY (calculated) -0.26
Length 241 amino acids
Sequence (TAIR10)
(BLAST)
001: MDIALFSPAS LFAADGDSSD GETTETSQNF VERNHQFPGI ELQIREFGFH QLNANLLWPG TFAFADWLLQ HRYLIERRRC LEIGSGTGAL AIFLKKEFNL
101: DITTSDYNDQ EIEDNIVHNC IANKIIPSLP HIKHTWGDEF PISEPDWDLI IASDILLYVK QYPNLIKSLT FLLKKYKPTN VVSPAEGADT ELPRPVFLMS
201: WRRRIGKDDE SLFFTGCEEA GLEVKHLGNR VYCIKLRESN L
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)