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AT4G40010.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.981
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : SNF1-related protein kinase 2.7
Curator
Summary (TAIR10)
encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress.
Computational
Description (TAIR10)
SNF1-related protein kinase 2.7 (SNRK2.7); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G33950.1); Has 113721 Blast hits to 111945 proteins in 3588 species: Archae - 122; Bacteria - 13185; Metazoa - 42626; Fungi - 12251; Plants - 25423; Viruses - 494; Other Eukaryotes - 19620 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G40010-MONOMERBioGrid:15442EC:2.7.11.1eggNOG:COG0515eggNOG:KOG0583EMBL:AL035708EMBL:AL161596
EMBL:CP002687EnsemblPlants:AT4G40010EnsemblPlants:AT4G40010.1entrez:830162GeneID:830162Genevisible:Q9SMQ4GO:GO:0004674
GO:GO:0005524GO:GO:0005634GO:GO:0005737GO:GO:0005829GO:GO:0006468GO:GO:0006970GO:GO:0009651
GO:GO:0016301GO:GO:0035556Gramene:AT4G40010.1hmmpanther:PTHR24343hmmpanther:PTHR24343:SF197HOGENOM:HOG000233016InParanoid:Q9SMQ4
InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441iPTMnet:Q9SMQ4KEGG:ath:AT4G40010KO:K14498
OMA:PEIEKHPPaxDb:Q9SMQ4Pfam:PF00069Pfam:Q9SMQ4Pfscan:PS50011PhylomeDB:Q9SMQ4PIR:T06107
PRIDE:Q9SMQ4PRO:PR:Q9SMQ4PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q9SMQ4Proteomes:UP000006548
Reactome:R-ATH-163680Reactome:R-ATH-200425Reactome:R-ATH-380972RefSeq:NP_195711.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMR:Q9SMQ4STRING:3702.AT4G40010.1SUPFAM:SSF56112TAIR:AT4G40010tair10-symbols:SNRK2-7tair10-symbols:SNRK2.7tair10-symbols:SRK2F
UniGene:At.54664UniProt:Q9SMQ4
Coordinates (TAIR10) chr4:-:18548704..18551056
Molecular Weight (calculated) 39777.00 Da
IEP (calculated) 4.63
GRAVY (calculated) -0.45
Length 350 amino acids
Sequence (TAIR10)
(BLAST)
001: MERYDILRDL GSGNFGVAKL VREKANGEFY AVKYIERGLK IDEHVQREII NHRDLKHPNI IRFKEVFVTP THLAIVMEYA AGGELFERIC NAGRFSEDEG
101: RYYFKQLISG VSYCHAMQIC HRDLKLENTL LDGSPSSHLK ICDFGYSKSS VLHSQPKSTV GTPAYVAPEV LSRKEYNGKI ADVWSCGVTL YVMLVGAYPF
201: EDPEDPRNIR NTIQRILSVH YTIPDYVRIS SECKHLLSRI FVADPDKRIT VPEIEKHPWF LKGPLVVPPE EEKCDNGVEE EEEEEEKCRQ SVEEIVKIIE
301: EARKGVNGTD NNGGLGLIDG SIDLDDIDDA DIYDDVDDDE ERNGDFVCAL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)