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AT4G39950.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
endoplasmic reticulum 0.995
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cytochrome P450, family 79, subfamily B, polypeptide 2
Curator
Summary (TAIR10)
Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates.
Computational
Description (TAIR10)
cytochrome P450, family 79, subfamily B, polypeptide 2 (CYP79B2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: in 8 processes; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily B, polypeptide 3 (TAIR:AT2G22330.1); Has 28507 Blast hits to 28366 proteins in 1550 species: Archae - 44; Bacteria - 2565; Metazoa - 10705; Fungi - 5395; Plants - 8898; Viruses - 0; Other Eukaryotes - 900 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G39950-MONOMERBioCyc:MetaCyc:AT4G39950-MONOMERBioGrid:15434BRENDA:1.14.13.125EC:1.14.13.125eggNOG:COG2124eggNOG:KOG0156
EMBL:AF069495EMBL:AL035708EMBL:AL161596EMBL:AY046017EMBL:AY091437EMBL:CP002687EnsemblPlants:AT4G39950
EnsemblPlants:AT4G39950.1entrez:830154Gene3D:1.10.630.10GeneID:830154Genevisible:O81346GO:GO:0002229GO:GO:0005506
GO:GO:0006569GO:GO:0006952GO:GO:0009414GO:GO:0009617GO:GO:0009625GO:GO:0009682GO:GO:0009684
GO:GO:0010120GO:GO:0016020GO:GO:0016021GO:GO:0016709GO:GO:0019761GO:GO:0020037GO:GO:0042742
GO:GO:0052544Gramene:AT4G39950.1gramene_plant_reactome:1119486gramene_plant_reactome:6875991hmmpanther:PTHR24298hmmpanther:PTHR24298:SF1HOGENOM:HOG000218628
InParanoid:O81346IntAct:O81346InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972iPTMnet:O81346KEGG:ath:AT4G39950
KO:K11812OMA:TAWVYNMPaxDb:O81346Pfam:O81346Pfam:PF00067PhylomeDB:O81346PIR:T06101
PIR:T51718PRIDE:O81346PRINTS:PR00385PRINTS:PR00463PRO:PR:O81346PROSITE:PS00086ProteinModelPortal:O81346
Proteomes:UP000006548RefSeq:NP_195705.1SABIO-RK:O81346scanprosite:PS00086SMR:O81346STRING:3702.AT4G39950.1SUPFAM:SSF48264
TAIR:AT4G39950tair10-symbols:CYP79B2TMHMM:TMhelixUniGene:At.20632UniProt:O81346
Coordinates (TAIR10) chr4:+:18525311..18527284
Molecular Weight (calculated) 61351.00 Da
IEP (calculated) 8.73
GRAVY (calculated) -0.19
Length 541 amino acids
Sequence (TAIR10)
(BLAST)
001: MNTFTSNSSD LTTTATETSS FSTLYLLSTL QAFVAITLVM LLKKLMTDPN KKKPYLPPGP TGWPIIGMIP TMLKSRPVFR WLHSIMKQLN TEIACVKLGN
101: THVITVTCPK IAREILKQQD ALFASRPLTY AQKILSNGYK TCVITPFGDQ FKKMRKVVMT ELVCPARHRW LHQKRSEEND HLTAWVYNMV KNSGSVDFRF
201: MTRHYCGNAI KKLMFGTRTF SKNTAPDGGP TVEDVEHMEA MFEALGFTFA FCISDYLPML TGLDLNGHEK IMRESSAIMD KYHDPIIDER IKMWREGKRT
301: QIEDFLDIFI SIKDEQGNPL LTADEIKPTI KELVMAAPDN PSNAVEWAMA EMVNKPEILR KAMEEIDRVV GKERLVQESD IPKLNYVKAI LREAFRLHPV
401: AAFNLPHVAL SDTTVAGYHI PKGSQVLLSR YGLGRNPKVW ADPLCFKPER HLNECSEVTL TENDLRFISF STGKRGCAAP ALGTALTTMM LARLLQGFTW
501: KLPENETRVE LMESSHDMFL AKPLVMVGDL RLPEHLYPTV K
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)