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AT4G39830.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.844
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cupredoxin superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cupredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, L-ascorbate oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117), L-ascorbate oxidase, plants (InterPro:IPR017760); BEST Arabidopsis thaliana protein match is: Plant L-ascorbate oxidase (TAIR:AT5G21100.1); Has 10346 Blast hits to 8779 proteins in 1558 species: Archae - 67; Bacteria - 4905; Metazoa - 456; Fungi - 3230; Plants - 1293; Viruses - 0; Other Eukaryotes - 395 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G39830-MONOMEReggNOG:COG2132eggNOG:KOG1263EMBL:AL022605EMBL:AL161596EMBL:BT015360EMBL:BT015885
EMBL:CP002687EnsemblPlants:AT4G39830EnsemblPlants:AT4G39830.1entrez:830142Gene3D:2.60.40.420GeneID:830142GO:GO:0005507
GO:GO:0005576GO:GO:0016491Gramene:AT4G39830.1gramene_pathway:1.10.3.3gramene_pathway:PWY-2261hmmpanther:PTHR11709hmmpanther:PTHR11709:SF28
HOGENOM:HOG000241916InterPro:IPR001117InterPro:IPR002355InterPro:IPR008972InterPro:IPR011706InterPro:IPR011707InterPro:IPR017760
InterPro:IPR033138KEGG:ath:AT4G39830OMA:NSFMTENPfam:PF00394Pfam:PF07731Pfam:PF07732PhylomeDB:O65670
PIR:T05020PROSITE:PS00079PROSITE:PS00080Proteomes:UP000006548RefSeq:NP_195693.1scanprosite:PS00079scanprosite:PS00080
SMR:O65670STRING:3702.AT4G39830.1SUPFAM:SSF49503TAIR:AT4G39830TIGRfam:TIGR03388TIGRFAMs:TIGR03388TMHMM:TMhelix
UniGene:At.43363UniProt:O65670
Coordinates (TAIR10) chr4:+:18479103..18481184
Molecular Weight (calculated) 66157.70 Da
IEP (calculated) 9.04
GRAVY (calculated) -0.34
Length 582 amino acids
Sequence (TAIR10)
(BLAST)
001: MMRPKRSSDT VHVFNLMVLC FIALFFSSVL CQGKIRRFKW EVKYEFKSPD CFEKLVITIN GKFPGPTIKA QQGDTIVVEL KNSFMTENVA VHWHGIRQIG
101: TPWFDGVEGV TQCPILPGEV FIYQFVVDRP GTYMYHSHYG MQRESGLIGM IQVSPPATEP EPFTYDYDRN FLLTDWYHKS MSEKATGLAS IPFKWVGEPQ
201: SLMIQGRGRF NCSNNLTTPP SLVSGVCNVS NADCSRFILT VIPGKTYRLR IGSLTALSAL SFQIEGHNLT VVEADGHYVE PFTVKNLFVY SGETYSVLLK
301: ADQNPRRNYW ITSSIVSRPA TTPPATAVLN YYPNHPRRRP PTSESSNIVP EWNDTRSRLA QSLAIKARRG FIHALPENSD KVIVLLNTQN EVNGYRRWSV
401: NNVSYHHPKT PYLIALKQNL TNAFDWRFTA PENYDSRNYD IFAKPLNANA TTSDGIYRLR FNSTVDVILQ NANTMNANNS ETHPWHLHGH DFWVLGYGEG
501: KFNESEDPKR YNRVDPIKKN TVAVQPFGWT ALRFRADNPG VWSFHCHIES HFFMGMGIVF ESGIDKVSSL PSSIMGCGQT KR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)