AT4G39670.1
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Subcellular Consensus
(Prediction and Experimental)  :max.
SUBAcon:cytosol 0.905 What is SUBAcon? What is ASURE? SUBAcon computations |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Glycolipid transfer protein (GLTP) family protein | ||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Glycolipid transfer protein (GLTP) family protein; FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: cytoplasm; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: Glycolipid transfer protein (GLTP) family protein (TAIR:AT2G34690.1); Has 290 Blast hits to 289 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 22; Plants - 133; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:18410172..18410861 | ||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 26515.30 Da | ||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.30 | ||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.32 | ||||||||||||||||||||||||||||||||||||||||||
| Length | 229 amino acids | ||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEAEVEEEEE DMFEDAVCTT QARVNTPLSV ITEAFEDLAD LVKPQRSDEI DEDELRLDDF CSACTHVSVL FNCLGFAFKF AEMEYIAKVK DLVEASKTFE 101: TLHNILDLDV EKETVKTPGS HSRNLRRVRQ GLDLIRAIFE QFLIADDYSL KDAATTAYTE VCAPFHTWAV RTAVYAGMYT LPTRDQLLLR LNETDQSVEK 201: NMRRYMEASR PIIEYIDKLY IERNIKLDW |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)