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AT4G39050.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 0.996
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24134884 (2013): cytoskeleton microtubules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : Kinesin motor family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Kinesin motor family protein; FUNCTIONS IN: microtubule motor activity, zinc ion binding, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Zinc finger, RING-type (InterPro:IPR001841), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: Kinesin motor family protein (TAIR:AT2G21380.1); Has 46191 Blast hits to 32952 proteins in 1570 species: Archae - 362; Bacteria - 3539; Metazoa - 22005; Fungi - 4349; Plants - 4299; Viruses - 335; Other Eukaryotes - 11302 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-769-MONOMEReggNOG:COG5059eggNOG:KOG0242EMBL:AB062739EMBL:AY150516EMBL:CP002687EnsemblPlants:AT4G39050
EnsemblPlants:AT4G39050.1entrez:830060Gene3D:3.30.40.10Gene3D:3.40.850.10GeneID:830060GO:GO:0003777GO:GO:0005524
GO:GO:0005874GO:GO:0007018GO:GO:0008270GO:GO:0031347Gramene:AT4G39050.1hmmpanther:PTHR24115hmmpanther:PTHR24115:SF386
IntAct:Q8W5R5InterPro:IPR001752InterPro:IPR001841InterPro:IPR013083InterPro:IPR019821InterPro:IPR027417InterPro:IPR027640
KEGG:ath:AT4G39050KO:K11498ncoils:CoilOMA:KYNDGARPANTHER:PTHR24115Pfam:PF00225Pfam:PF13920
Pfscan:PS50067Pfscan:PS50089PhylomeDB:Q8W5R5PRINTS:PR00380PROSITE:PS00411PROSITE:PS50067PROSITE:PS50089
Proteomes:UP000006548RefSeq:NP_195616.2scanprosite:PS00411SMART:SM00129SMR:Q8W5R5STRING:3702.AT4G39050.1SUPFAM:SSF52540
SUPFAM:SSF57850TAIR:AT4G39050UniGene:At.27357UniProt:Q8W5R5
Coordinates (TAIR10) chr4:+:18193462..18200148
Molecular Weight (calculated) 116470.00 Da
IEP (calculated) 5.40
GRAVY (calculated) -0.53
Length 1055 amino acids
Sequence (TAIR10)
(BLAST)
0001: MASSSSRTRS SRPPSPASST SSSHLSNRLI PRSNSTSASS LITSAAGIAS RSMTPSRTFS DSGLIGSGSF GIGSPVPYPS EELLGDPMDD TISSERDSIS
0101: VTVRFRPLSD REYQRGDEVA WYPDGDTLVR HEYNPLTAYA FDKVFGPQAT TIDVYDVAAR PVVKAAMEGV NGTVFAYGVT SSGKTHTMHG DQESPGIIPL
0201: AIKDVFSIIQ DTPGREFLLR VSYLEIYNEV INDLLDPTGQ NLRVREDSQG TYVEGIKEEV VLSPGHALSF IAAGEEHRHV GSNNFNLLSS RSHTIFTLMV
0301: ESSATGDEYD GVIFSQLNLI DLAGSESSKT ETTGLRRKEG SYINKSLLTL GTVIGKLSEG KATHIPYRDS KLTRLLQSSL SGHGHVSLIC TITPASSSSE
0401: ETHNTLKFAS RAKSIEIYAS RNQIIDEKSL IKKYQREIST LKLELDQLRR GMLVGVSHEE LMSLKQQLEE GQVKMQSRLE EEEEAKAALM SRIQKLTKLI
0501: LVSTKNSIPG YSGDIPTHQR SLSAGKDDKF DSLLLESDNL GSPSSTLALL SEGSLGFNHR RSSSKLNDEN SPGAEFTQGV MTPDEIDLLV EQVKMLAGEI
0601: AFSTSTLKRL VDQSVNDPEN SQTQIQNLER EIHEKQRQMR GLEQLIIESG EASIANASLV EMQQKVMSLM TQCNEKSFEL EIKSADNCIL QEQLQEKCTE
0701: NKELHEKVNL LEQRLNAVSS EKSSPSCSNK AVSGEYADEL KKKIQSQEIE NEELKLEHVQ IVEENSGLRV QNQKLAEEAS YAKELASAAA VELKNLASEV
0801: TKLSLQNTKL EKELAAARDL AQTRNPMNGV NRKYNDGARS GRKGRISSSR SSGDEFDAWN LDPEDLKMEL QVRKQREVAL ESALAEKEFI EDEYRKKAEE
0901: AKRREEALEN DLANMWVLVA KLKKDNGALP EPNGTDPGRE LEKSQSHAVL KERQVSSAPR QPEVVVVAKT EETPKEEPLV ARLKARMQEM KEKEMKSQAN
1001: GDANSHICKV CFESPTAAIL LPCRHFCLCK SCSLACSECP ICRTKISDRL FAFPS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)