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AT4G38970.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:16414959 (2006): plastid plastid stroma plastoglobules
  • PMID:27943495 (2017): mitochondrion
  • PMID:27177187 (2016): nucleus
  • PMID:27122571 (2016): mitochondrion
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25740923 (2015): plastid
  • PMID:25641898 (2015): plasma membrane
  • PMID:24872594 (2014): plastid plastid envelope
  • PMID:24872594 (2014): plastid plastid thylakoid
  • PMID:24872594 (2014): plastid plastid stroma
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:23851315 (2013): plastid
  • PMID:23667806 (2013): plastid plastid thylakoid
  • PMID:22274653 (2012): plastid
  • PMID:22215637 (2012): plasma membrane
  • PMID:21539947 (2011): plastid plastid stroma
  • PMID:21531424 (2011): plastid
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:19334764 (2009): plasma membrane
  • PMID:19288221 (2010): plastid
  • PMID:18633119 (2008): plastid plastid stroma
  • PMID:18433418 (2008): plastid plastid stroma
  • PMID:18431481 (2008): plastid plastid stroma
  • PMID:16648217 (2006): plastid
  • PMID:16461379 (2006): plastid plastid stroma plastoglobules
  • PMID:16414959 (2006): plastid plastid stroma plastoglobules
  • PMID:16207701 (2006): plastid
  • PMID:15028209 (2004): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : fructose-bisphosphate aldolase 2
Curator
Summary (TAIR10)
Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.
Computational
Description (TAIR10)
fructose-bisphosphate aldolase 2 (FBA2); FUNCTIONS IN: fructose-bisphosphate aldolase activity, catalytic activity; INVOLVED IN: response to cadmium ion, pentose-phosphate shunt, response to abscisic acid stimulus; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 1 (TAIR:AT2G21330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G38970-MONOMERBioCyc:ARA:GQT-2393-MONOMERBioGrid:15332EC:4.1.2.13eggNOG:COG3588eggNOG:KOG1557EMBL:AF428455
EMBL:AK226247EMBL:AL035679EMBL:AL161594EMBL:BT015870EMBL:CP002687EnsemblPlants:AT4G38970EnsemblPlants:AT4G38970.1
entrez:830052ExpressionAtlas:Q944G9Gene3D:3.20.20.70GeneID:830052Genevisible:Q944G9GO:GO:0004332GO:GO:0006096
GO:GO:0009507GO:GO:0009570GO:GO:0009579GO:GO:0009737GO:GO:0009941GO:GO:0010287GO:GO:0016020
GO:GO:0046686GO:GO:0048046gramene_pathway:4.1.2.13gramene_pathway:CALVIN-PWYgramene_pathway:GLYCOLYSISgramene_pathway:PWY-1042gramene_pathway:PWYQT-4428
hmmpanther:PTHR11627hmmpanther:PTHR11627:SF15HOGENOM:HOG000220876InParanoid:Q944G9InterPro:IPR000741InterPro:IPR013785InterPro:IPR029768
iPTMnet:Q944G9KEGG:00010+4.1.2.13KEGG:00030+4.1.2.13KEGG:00051+4.1.2.13KEGG:00680+4.1.2.13KEGG:00710+4.1.2.13KEGG:ath:AT4G38970
KO:K01623OMA:VRSHPSGPaxDb:Q944G9Pfam:PF00274Pfam:Q944G9PIR:T06057PRIDE:Q944G9
PRO:PR:Q944G9PROSITE:PS00158ProteinModelPortal:Q944G9Proteomes:UP000006548RefSeq:NP_568049.1scanprosite:PS00158SMR:Q944G9
STRING:3702.AT4G38970.1SUPFAM:SSF51569TAIR:AT4G38970tair10-symbols:FBA2UniGene:At.21716UniGene:At.24925UniGene:At.72607
UniGene:At.75329UniPathway:UPA00109UniProt:Q944G9
Coordinates (TAIR10) chr4:-:18163714..18165659
Molecular Weight (calculated) 42990.20 Da
IEP (calculated) 7.34
GRAVY (calculated) -0.17
Length 398 amino acids
Sequence (TAIR10)
(BLAST)
001: MASTSLLKAS PVLDKSEWVK GQSVLFRQPS SASVVLRNRA TSLTVRAASS YADELVKTAK TIASPGRGIL AMDESNATCG KRLDSIGLEN TEANRQAFRT
101: LLVSAPGLGQ YVSGAILFEE TLYQSTTEGK KMVDVLVEQN IVPGIKVDKG LVPLVGSNNE SWCQGLDGLS SRTAAYYQQG ARFAKWRTVV SIPNGPSALA
201: VKEAAWGLAR YAAISQDSGL VPIVEPEILL DGEHDIDRTY DVAEKVWAEV FFYLAQNNVM FEGILLKPSM VTPGAESKDR ATPEQVAAYT LKLLRNRVPP
301: AVPGIMFLSG GQSEVEATLN LNAMNQAPNP WHVSFSYARA LQNTCLKTWG GRPENVNAAQ TTLLARAKAN SLAQLGKYTG EGESEEAKEG MFVKGYTY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)