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AT4G38800.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25641898 (2015): plasma membrane
  • PMID:21166475 (2011): cytosol
  • PMID:17644812 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : methylthioadenosine nucleosidase 1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
methylthioadenosine nucleosidase 1 (MTN1); FUNCTIONS IN: catalytic activity, methylthioadenosine nucleosidase activity; INVOLVED IN: L-methionine salvage from methylthioadenosine, nucleoside metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphorylase (InterPro:IPR000845), Nucleoside phosphorylase, family 1 (InterPro:IPR018017); BEST Arabidopsis thaliana protein match is: Phosphorylase superfamily protein (TAIR:AT4G34840.1); Has 2898 Blast hits to 2898 proteins in 1272 species: Archae - 0; Bacteria - 2765; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G38800-MONOMERBioGrid:15315BRENDA:2.4.2.28BRENDA:3.2.2.9EC:3.2.2.9eggNOG:ENOG410IEX0eggNOG:ENOG4111IXC
EMBL:AF370297EMBL:AL035656EMBL:AL161594EMBL:AY142681EMBL:CP002687EnsemblPlants:AT4G38800EnsemblPlants:AT4G38800.1
entrez:830035EvolutionaryTrace:Q9T0I8Gene3D:3.40.50.1580GeneID:830035Genevisible:Q9T0I8GO:GO:0000003GO:GO:0001944
GO:GO:0005829GO:GO:0005886GO:GO:0008782GO:GO:0008930GO:GO:0009116GO:GO:0019509Gramene:AT4G38800.1
gramene_pathway:3.2.2.16gramene_pathway:PWY-4361-ARAgramene_plant_reactome:1119624gramene_plant_reactome:6876898hmmpanther:PTHR21234hmmpanther:PTHR21234:SF16HOGENOM:HOG000241650
IntAct:Q9T0I8InterPro:IPR000845InterPro:IPR018017iPTMnet:Q9T0I8KEGG:ath:AT4G38800KO:K01244OMA:MYGIGAR
PANTHER:PTHR21234PaxDb:Q9T0I8PDB:2H8GPDB:2QSUPDB:2QTGPDB:2QTTPDB:3LGS
PDBsum:2H8GPDBsum:2QSUPDBsum:2QTGPDBsum:2QTTPDBsum:3LGSPfam:PF01048Pfam:Q9T0I8
PhylomeDB:Q9T0I8PIR:T06079PRIDE:Q9T0I8PRO:PR:Q9T0I8ProteinModelPortal:Q9T0I8Proteomes:UP000006548RefSeq:NP_195591.1
SMR:Q9T0I8STRING:3702.AT4G38800.1SUPFAM:SSF53167TAIR:AT4G38800tair10-symbols:ATMTAN1tair10-symbols:ATMTN1tair10-symbols:MTAN1
tair10-symbols:MTN1UniGene:At.2827UniGene:At.31148UniPathway:UPA00904UniProt:Q9T0I8
Coordinates (TAIR10) chr4:-:18113355..18114996
Molecular Weight (calculated) 28452.40 Da
IEP (calculated) 4.43
GRAVY (calculated) 0.27
Length 267 amino acids
Sequence (TAIR10)
(BLAST)
001: MAPHGDGLSD IEEPEVDAQS EILRPISSVV FVIAMQAEAL PLVNKFGLSE TTDSPLGKGL PWVLYHGVHK DLRINVVCPG RDAALGIDSV GTVPASLITF
101: ASIQALKPDI IINAGTCGGF KVKGANIGDV FLVSDVVFHD RRIPIPMFDL YGVGLRQAFS TPNLLKELNL KIGRLSTGDS LDMSTQDETL IIANDATLKD
201: MEGAAVAYVA DLLKIPVVFL KAVTDLVDGD KPTAEEFLQN LTVVTAALEG TATKVINFIN GRNLSDL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)