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AT4G38570.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.574
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2 (PIS2); FUNCTIONS IN: phosphotransferase activity, for other substituted phosphate groups; INVOLVED IN: phosphatidylinositol biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CDP-alcohol phosphatidyltransferase (InterPro:IPR000462), CDP-diacylglycerol-inositol 3-phosphatidyltransferase, eukaryote (InterPro:IPR014387); BEST Arabidopsis thaliana protein match is: phosphatidylinositol synthase 1 (TAIR:AT1G68000.1); Has 2530 Blast hits to 2530 proteins in 950 species: Archae - 14; Bacteria - 1497; Metazoa - 167; Fungi - 185; Plants - 77; Viruses - 0; Other Eukaryotes - 590 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G38570-MONOMERBRENDA:2.7.8.11EC:2.7.8.11eggNOG:COG0558eggNOG:KOG3240EMBL:AL035540EMBL:AL161593
EMBL:AY086801EMBL:BT002432EMBL:CP002687EnsemblPlants:AT4G38570EnsemblPlants:AT4G38570.1entrez:830014ExpressionAtlas:Q8GUK6
GeneID:830014Genevisible:Q8GUK6GO:GO:0003881GO:GO:0005783GO:GO:0005794GO:GO:0008654GO:GO:0016021
GO:GO:0046872gramene_pathway:2.7.8.11gramene_pathway:PHOSLIPSYN2-PWYhmmpanther:PTHR15362hmmpanther:PTHR15362:SF4HOGENOM:HOG000204051InParanoid:Q8GUK6
InterPro:IPR000462InterPro:IPR014387KEGG:00562+2.7.8.11KEGG:00564+2.7.8.11KEGG:04070+2.7.8.11OMA:VAWVGYYPaxDb:Q8GUK6
Pfam:PF01066Pfam:Q8GUK6PhylomeDB:Q8GUK6PIR:T05685PIRSF:PIRSF000848PRIDE:Q8GUK6PRO:PR:Q8GUK6
PROSITE:PS00379ProteinModelPortal:Q8GUK6Proteomes:UP000006548Reactome:R-ATH-1483226RefSeq:NP_195569.1scanprosite:PS00379SMR:Q8GUK6
STRING:3702.AT4G38570.1TAIR:AT4G38570tair10-symbols:PIS2TMHMM:TMhelixUniGene:At.48962UniGene:At.71025UniProt:Q8GUK6
Coordinates (TAIR10) chr4:-:18031420..18033091
Molecular Weight (calculated) 25581.90 Da
IEP (calculated) 8.67
GRAVY (calculated) 0.59
Length 225 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKQRPATLS VYLYIPNIVG YMRVLLNCIA FSVCFSNKTL FSLLYFFSFC CDAVDGWCAR KFNQVSTFGA VLDMVTDRVS TACLLVILSQ IYRPSLVFLS
101: LLALDIASHW LQMYSTFLSG KTSHKDVKDS TSWLFRLYYG NRMFMGYCCV SCEVLYIILL LIATNQTENL MNVVVKSLMQ ISPLSLLLAL SIFGWSIKQI
201: INVIQMKTAA DVCVLYDIEK QHKKP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)