suba logo
AT4G38470.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
cytosol 0.998
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:18433157 (2008): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ACT-like protein tyrosine kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ACT-like protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Amino acid-binding ACT (InterPro:IPR002912), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: ACT-like protein tyrosine kinase family protein (TAIR:AT4G35780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
DNASU:830003EC:2.7.11.1eggNOG:COG0515eggNOG:KOG0192EMBL:AK221091EMBL:AL035540EMBL:AL161593
EMBL:CP002687EnsemblPlants:AT4G38470EnsemblPlants:AT4G38470.1entrez:830003GeneID:830003Genevisible:F4JTP5GO:GO:0004674
GO:GO:0004712GO:GO:0005524GO:GO:0005829GO:GO:0009658GO:GO:0016597Gramene:AT4G38470.1hmmpanther:PTHR23257
hmmpanther:PTHR23257:SF471InParanoid:F4JTP5InterPro:IPR000719InterPro:IPR001245InterPro:IPR002912InterPro:IPR008271InterPro:IPR011009
iPTMnet:F4JTP5KEGG:ath:AT4G38470ncoils:CoilOMA:PEKENGQPaxDb:F4JTP5Pfam:PF01842Pfam:PF07714
Pfscan:PS50011Pfscan:PS51671PIR:T05675PRIDE:F4JTP5PRINTS:PR00109PROSITE:PS00108PROSITE:PS50011
PROSITE:PS51671ProteinModelPortal:F4JTP5Proteomes:UP000006548RefSeq:NP_568041.1scanprosite:PS00108SMART:SM00220SMR:F4JTP5
STRING:3702.AT4G38470.1SUPFAM:SSF55021SUPFAM:SSF56112TAIR:AT4G38470UniGene:At.22724UniProt:F4JTP5
Coordinates (TAIR10) chr4:+:17999432..18003551
Molecular Weight (calculated) 64815.00 Da
IEP (calculated) 5.92
GRAVY (calculated) -0.44
Length 575 amino acids
Sequence (TAIR10)
(BLAST)
001: MVMEDNESCA SRVIFDALPT SQATMDRRER IKMEVFDEVL RRLRQSDIED AHLPGFEDDL WNHFNRLPAR YALDVNVERA EDVLMHKRLL HSAYDPQNRP
101: AIEVHLVQVQ PAGISADLDS TSNDAGHSSP TRKSIHPPPA FGSSPNLEAL ALAASLSQDE DADNSVHNNS LYSRPLHEIT FSTEDKPKLL FQLTALLAEL
201: GLNIQEAHAF STTDGYSLDV FVVDGWPYEE TERLRISLEK EAAKIELQSQ SWPMQQSFSP EKENGQTGAR THVPIPNDGT DVWEINLKHL KFGHKIASGS
301: YGDLYKGTYC SQEVAIKVLK PERLDSDLEK EFAQEVFIMR KVRHKNVVQF IGACTKPPHL CIVTEFMPGG SVYDYLHKQK GVFKLPTLFK VAIDICKGMS
401: YLHQNNIIHR DLKAANLLMD ENEVVKVADF GVARVKAQTG VMTAETGTYR WMAPEVIEHK PYDHKADVFS YGIVLWELLT GKLPYEYMTP LQAAVGVVQK
501: GLRPTIPKNT HPKLAELLER LWEHDSTQRP DFSEIIEQLQ EIAKEVGEEG EEKKKSSTGL GGGIFAALRR STTHH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)