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AT4G38230.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.852
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : calcium-dependent protein kinase 26
Curator
Summary (TAIR10)
member of Calcium Dependent Protein Kinase
Computational
Description (TAIR10)
calcium-dependent protein kinase 26 (CPK26); FUNCTIONS IN: calmodulin-dependent protein kinase activity, protein kinase activity, kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Calcium-dependent protein kinase family protein (TAIR:AT2G17290.1); Has 94022 Blast hits to 87051 proteins in 3195 species: Archae - 49; Bacteria - 6802; Metazoa - 37554; Fungi - 14737; Plants - 17453; Viruses - 106; Other Eukaryotes - 17321 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT4G38230EnsemblPlants:AT4G38230.1entrez:829980hmmpanther:PTHR24349hmmpanther:PTHR24349:SF83Pfam:PF00069Pfam:PF13499
Pfscan:PS50011Pfscan:PS50222scanprosite:PS00018tair10-symbols:ATCPK26tair10-symbols:CPK26
Coordinates (TAIR10) chr4:-:17928994..17930486
Molecular Weight (calculated) 38206.60 Da
IEP (calculated) 4.65
GRAVY (calculated) -0.22
Length 340 amino acids
Sequence (TAIR10)
(BLAST)
001: MHRDLKPENF LLVNKDDDFS LKAIDFGLSV FFKPGQIFED VVGSPYYVAP EVLLKHYGPE ADVWTAGVIL YILVSGVPPF WAETQQGIFD AVLKGHIDFD
101: SDPWPLISDS AKNLIRGMLC SRPSERLTAH QVLRHPWICE NGVAPDRALD PAVLSRLKQF SAMNKLKQMA LRVIAESLSE EEIAGLKEMF KAMDTDNSGA
201: ITFDELKAGL RRYGSTLKDT EIRDLMEAAD IDKSGTIDYG EFIAATIHLN KLEREEHLLS AFRYFDKDGS GYITIDELQH ACAEQGMSDV FLEDVIKEVD
301: QDNDGRIDYG EFVAMMQKGI VGRTMRKSIN MSIRNNAVSQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)