AT4G38050.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Xanthine/uracil permease family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Xanthine/uracil permease family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: nucleobase-ascorbate transporter 12 (TAIR:AT2G27810.1); Has 9537 Blast hits to 9467 proteins in 1922 species: Archae - 69; Bacteria - 7876; Metazoa - 365; Fungi - 138; Plants - 431; Viruses - 1; Other Eukaryotes - 657 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:17869529..17872461 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 77918.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.04 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.15 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 709 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDSGSGFDPD TGNNKGNGSG GGNGYGERKF GAFFKRVEPF LPKKDLNPRD LRSWAKKTGF VSDYSGETST STRTKFGESS DFDLPKGRDQ VVTGSSHKTE 101: IDPILGRNRP EIEHVTGSEP VSREEEERRL NRNEATPETE NEGGKINKDL ENGFYYPGGG GESSEDGQWP KPILMKFGLR DNPGFVPLIY YGLQHYLSLV 201: GSLVFIPLVI VPAMDGSDKD TASVISTMLL LTGVTTILHC YFGTRLPLVQ GSSFVYLAPV LVVINSEEFR NLTEHKFRDT MRELQGAIIV GSLFQCILGF 301: SGLMSLLLRF INPVVVAPTV AAVGLAFFSY GFPQAGTCVE ISVPLILLLL IFTLYLRGVS LFGHRLFRIY AVPLSALLIW TYAFFLTVGG AYDYRGCNAD 401: IPSSNILIDE CKKHVYTMKH CRTDASNAWR TASWVRIPYP FQWGFPNFHM RTSIIMIFVS LVASVDSVGT YHSASMIVNA KRPTRGIVSR GIALEGFCSL 501: LAGIWGSGTG STTLTENIHT INITKVASRR ALVIGAMFLI VLSFLGKLGA ILASIPQALA ASVLCFIWAL TVSLGLSNLR YTQTASFRNI TIVGVSLFLG 601: LSIPAYFQQY QPLSSLILPS YYIPFGAASS GPFQTGIEQL DFAMNAVLSL NMVVTFLLAF ILDNTVPGSK EERGVYVWTR AEDMQMDPEM RADYSLPRKF 701: AQIFGCRCC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)