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AT4G37990.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.972
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : elicitor-activated gene 3-2
Curator
Summary (TAIR10)
Encodes an aromatic alcohol:NADP+ oxidoreductase whose mRNA levels are increased in response to treatment with a variety of phytopathogenic bacteria. Though similar to mannitol dehydrogenases, this enzyme does not have mannitol dehydrogenase activity.
Computational
Description (TAIR10)
elicitor-activated gene 3-2 (ELI3-2); CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: elicitor-activated gene 3-1 (TAIR:AT4G37980.1); Has 39982 Blast hits to 39962 proteins in 3075 species: Archae - 828; Bacteria - 26485; Metazoa - 1263; Fungi - 3046; Plants - 3202; Viruses - 3; Other Eukaryotes - 5155 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G37990-MONOMEREC:1.1.1.195eggNOG:COG1064eggNOG:KOG0023EMBL:AF361859EMBL:AL035538EMBL:AL161592
EMBL:AY129478EMBL:AY302080EMBL:CP002687EMBL:X67815EnsemblPlants:AT4G37990EnsemblPlants:AT4G37990.1entrez:829955
Gene3D:3.40.50.720Gene3D:3.90.180.10GeneID:829955Genevisible:Q02972GO:GO:0008270GO:GO:0009617GO:GO:0009809
GO:GO:0045551GO:GO:0047681GO:GO:0052747Gramene:AT4G37990.1HOGENOM:HOG000294667InParanoid:Q02972InterPro:IPR002328
InterPro:IPR011032InterPro:IPR013149InterPro:IPR013154InterPro:IPR016040InterPro:IPR020843iPTMnet:Q02972KEGG:ath:AT4G37990
KO:K00083OMA:FCGLCHSPaxDb:Q02972Pfam:PF00107Pfam:PF08240Pfam:Q02972PhylomeDB:Q02972
PIR:S28043PRIDE:Q02972PRO:PR:Q02972PROSITE:PS00059ProteinModelPortal:Q02972Proteomes:UP000006548RefSeq:NP_195512.1
SABIO-RK:Q02972scanprosite:PS00059SMART:SM00829SMR:Q02972STRING:3702.AT4G37990.1SUPFAM:SSF50129SUPFAM:SSF51735
TAIR:AT4G37990tair10-symbols:ATCAD8tair10-symbols:CAD-B2tair10-symbols:ELI3tair10-symbols:ELI3-2UniGene:At.41UniPathway:UPA00711
UniProt:Q02972
Coordinates (TAIR10) chr4:+:17855964..17857388
Molecular Weight (calculated) 38944.70 Da
IEP (calculated) 7.25
GRAVY (calculated) -0.01
Length 359 amino acids
Sequence (TAIR10)
(BLAST)
001: MGKVLQKEAF GLAAKDNSGV LSPFSFTRRE TGEKDVRFKV LFCGICHSDL HMVKNEWGMS TYPLVPGHEI VGVVTEVGAK VTKFKTGEKV GVGCLVSSCG
101: SCDSCTEGME NYCPKSIQTY GFPYYDNTIT YGGYSDHMVC EEGFVIRIPD NLPLDAAAPL LCAGITVYSP MKYHGLDKPG MHIGVVGLGG LGHVGVKFAK
201: AMGTKVTVIS TSEKKRDEAI NRLGADAFLV SRDPKQIKDA MGTMDGIIDT VSATHSLLPL LGLLKHKGKL VMVGAPEKPL ELPVMPLIFE RKMVMGSMIG
301: GIKETQEMID MAGKHNITAD IELISADYVN TAMERLEKAD VRYRFVIDVA NTLKPNPNL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)