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AT4G37910.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27943495 (2017): mitochondrion
  • PMID:27122571 (2016): mitochondrion
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24727099 (2014): mitochondrion
  • PMID:22923678 (2012): mitochondrion
  • PMID:22318864 (2012): plasma membrane
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:21841088 (2011): mitochondrion
  • PMID:21472856 (2011): mitochondrion
  • PMID:21433285 (2011): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:17137349 (2006): mitochondrion
  • PMID:15276431 (2004): mitochondrion
  • PMID:14671022 (2004): mitochondrion
  • PMID:11743115 (2001): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : mitochondrial heat shock protein 70-1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
mitochondrial heat shock protein 70-1 (mtHsc70-1); FUNCTIONS IN: zinc ion binding, ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to salt stress; LOCATED IN: mitochondrion, cell wall, plasma membrane, mitochondrial matrix; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Chaperone DnaK (InterPro:IPR012725), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: mitochondrial HSO70 2 (TAIR:AT5G09590.1); Has 34941 Blast hits to 34814 proteins in 4850 species: Archae - 159; Bacteria - 17270; Metazoa - 3545; Fungi - 1638; Plants - 1233; Viruses - 309; Other Eukaryotes - 10787 (source: NCBI BLink).
Protein Annotations
BioGrid:15228eggNOG:COG0443eggNOG:KOG0102EMBL:AK221937EMBL:AL035538EMBL:AL161592EMBL:BT002390
EMBL:BT008430EMBL:CP002687EnsemblPlants:AT4G37910EnsemblPlants:AT4G37910.1entrez:829947Gene3D:1.20.1270.10Gene3D:2.60.34.10
GeneID:829947Genevisible:Q8GUM2GO:GO:0005524GO:GO:0005618GO:GO:0005739GO:GO:0005774GO:GO:0006457
GO:GO:0008270GO:GO:0009651GO:GO:0009735GO:GO:0046686Gramene:AT4G37910.1HAMAP:MF_00332hmmpanther:PTHR19375
hmmpanther:PTHR19375:SF179HOGENOM:HOG000228135InParanoid:Q8GUM2IntAct:Q8GUM2InterPro:IPR012725InterPro:IPR013126InterPro:IPR018181
InterPro:IPR029047InterPro:IPR029048iPTMnet:Q8GUM2KEGG:ath:AT4G37910KO:K04043MINT:MINT-8385635ncoils:Coil
OMA:HRTISPCPaxDb:Q8GUM2Pfam:PF00012Pfam:Q8GUM2PhylomeDB:Q8GUM2PIR:T05618PRIDE:Q8GUM2
PRINTS:PR00301PRO:PR:Q8GUM2PROSITE:PS00297PROSITE:PS00329PROSITE:PS01036ProteinModelPortal:Q8GUM2Proteomes:UP000006548
RefSeq:NP_195504.2scanprosite:PS00297scanprosite:PS00329scanprosite:PS01036SMR:Q8GUM2STRING:3702.AT4G37910.1SUPFAM:SSF100920
SUPFAM:SSF53067SwissPalm:Q8GUM2TAIR:AT4G37910tair10-symbols:mtHsc70-1TIGRfam:TIGR02350TIGRFAMs:TIGR02350UniGene:At.2734
UniProt:Q8GUM2
Coordinates (TAIR10) chr4:-:17825368..17828099
Molecular Weight (calculated) 73079.10 Da
IEP (calculated) 5.25
GRAVY (calculated) -0.29
Length 682 amino acids
Sequence (TAIR10)
(BLAST)
001: MASVALLRSF RRREVQMASV SAFKSVSANG KNSMFGKLGY LARPFCSRPV GNDVIGIDLG TTNSCVSVME GKTARVIENA EGSRTTPSVV AMNQKGELLV
101: GTPAKRQAVT NPTNTIFGSK RLIGRRFDDP QTQKEMKMVP YKIVKAPNGD AWVEANGQKF SPSQIGANVL TKMKETAEAY LGKSINKAVV TVPAYFNDAQ
201: RQATKDAGKI AGLDVQRIIN EPTAAALSYG MNNKEGVIAV FDLGGGTFDV SILEISSGVF EVKATNGDTF LGGEDFDNTL LEYLVNEFKR SDNIDLTKDN
301: LALQRLREAA EKAKIELSST TQTEINLPFI TADASGAKHL NITLTRSKFE GLVGKLIERT RSPCQNCLKD AGVTIKEVDE VLLVGGMTRV PKVQEIVSEI
401: FGKSPCKGVN PDEAVAMGAA IQGGILRGDV KDLLLLDVVP LSLGIETLGA VFTKLIPRNT TIPTKKSQVF STAADNQMQV GIKVLQGERE MAADNKVLGE
501: FDLVGIPPAP RGMPQIEVTF DIDANGITTV SAKDKATGKE QNITIRSSGG LSDDEINRMV KEAELNAQKD QEKKQLIDLR NSADTTIYSV EKSLSEYREK
601: IPAEIASEIE TAVSDLRTAM AGEDVEDIKA KVEAANKAVS KIGEHMSKGS GSSGSDGSSG EGTSGTEQTP EAEFEEASGS RK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)