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AT4G37740.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : growth-regulating factor 2
Curator
Summary (TAIR10)
Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower
Computational
Description (TAIR10)
growth-regulating factor 2 (GRF2); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 1 (TAIR:AT2G22840.1); Has 745 Blast hits to 714 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 24; Plants - 532; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink).
Protein Annotations
BioGrid:15211eggNOG:ENOG410IH4JeggNOG:ENOG410YFT7EMBL:AB493726
EMBL:AK176372EMBL:AK176432EMBL:AL035709EMBL:AL161592
EMBL:AY102635EMBL:CP002687EnsemblPlants:AT4G37740EnsemblPlants:AT4G37740.1
entrez:829930GeneID:829930Genevisible:Q8L8A8GO:GO:0005524
GO:GO:0005634GO:GO:0006351GO:GO:0006355GO:GO:0008285
GO:GO:0048364Gramene:AT4G37740.1hmmpanther:PTHR31602hmmpanther:PTHR31602:SF2
HOGENOM:HOG000243855InParanoid:Q8L8A8IntAct:Q8L8A8InterPro:IPR014977
InterPro:IPR014978InterPro:IPR031137KEGG:ath:AT4G37740OMA:IPLMRSA
PANTHER:PTHR31602PaxDb:Q8L8A8Pfam:PF08879Pfam:PF08880
Pfam:Q8L8A8Pfscan:PS51666Pfscan:PS51667PhylomeDB:Q8L8A8
PIR:T06021PRIDE:Q8L8A8PRO:PR:Q8L8A8PROSITE:PS51666
PROSITE:PS51667ProteinModelPortal:Q8L8A8Proteomes:UP000006548RefSeq:NP_195488.2
SMART:SM00951STRING:3702.AT4G37740.1TAIR:AT4G37740tair10-symbols:AtGRF2
tair10-symbols:GRF2UniGene:At.2873UniProt:Q8L8A8
Coordinates (TAIR10) chr4:-:17725533..17727609
Molecular Weight (calculated) 58588.00 Da
IEP (calculated) 8.89
GRAVY (calculated) -0.67
Length 535 amino acids
Sequence (TAIR10)
(BLAST)
001: MDIGVHVLGS VTSNENESLG LKELIGTKQD RSGFIGEDCL QRSLKLARTT TRAEEEENLS SSVAAAYCKT MSFHQGIPLM RSASPLSSDS RRQEQMLSFS
101: DKPDALDFSK YVGLDNSSNN KNSLSPFLHQ IPPPSYFRSS GGYGSGGMMM NMSMQGNFTG VKGPFTLTQW AELEQQALIY KYITANVPVP SSLLISIKKS
201: FYPYGSLPPS SFGWGTFHLG FAGGNMDPEP GRCRRTDGKK WRCSRDAVPD QKYCERHINR GRHRSRKPVE VQSGQNQTAA AASKAVTTPQ QPVVAGNTNR
301: SNARASSNRS LAIGSQYINP STESLPNNRG VSIYPSTVNL QPKESPVIHQ KHRNNNNPFE FGHISSDSLL NPNTAKTYGS SFLDFSSNQE KHSGNHNHNS
401: WPEELTSDWT QLSMSIPIAS SSPSSTHNNN NAQEKTTLSP LRLSRELDLS IQTDETTIEP TVKKVNTWIP ISWGNSLGGP LGEVLNSTTN SPTFGSSPTG
501: VLQKSTFCSL SNNSSVSSPI AENNRHNGDY FHYTT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)