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AT4G37580.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.993
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Acyl-CoA N-acyltransferases (NAT) superfamily protein
Curator
Summary (TAIR10)
involved in apical hook development. putative N-acetyltransferase
Computational
Description (TAIR10)
HOOKLESS 1 (HLS1); CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G23060.1); Has 145 Blast hits to 145 proteins in 38 species: Archae - 22; Bacteria - 20; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
EC:2.3.1.-eggNOG:ENOG410IGKIeggNOG:ENOG410YF8WEMBL:AK175660
EMBL:AK176117EMBL:AL035605EMBL:AL161591EMBL:BT026435
EMBL:CP002687EMBL:U50399EMBL:U50400EnsemblPlants:AT4G37580
EnsemblPlants:AT4G37580.1entrez:829913Gene3D:3.40.630.30GeneID:829913
Genevisible:Q42381GO:GO:0004596GO:GO:0006474GO:GO:0008080
GO:GO:0009640GO:GO:0009723GO:GO:0009734GO:GO:0009826
GO:GO:0031248GO:GO:0040008Gramene:AT4G37580.1hmmpanther:PTHR23091
hmmpanther:PTHR23091:SF211HOGENOM:HOG000238837InParanoid:Q42381InterPro:IPR000182
InterPro:IPR016181KEGG:ath:AT4G37580OMA:YPPESWAPaxDb:Q42381
Pfam:PF00583Pfam:Q42381Pfscan:PS51186PhylomeDB:Q42381
PIR:S71236PRIDE:Q42381PRO:PR:Q42381PROSITE:PS51186
ProteinModelPortal:Q42381Proteomes:UP000006548RefSeq:NP_195474.1STRING:3702.AT4G37580.1
SUPFAM:SSF55729TAIR:AT4G37580tair10-symbols:COP3tair10-symbols:HLS1
tair10-symbols:UNS2UniGene:At.2812UniProt:Q42381
Coordinates (TAIR10) chr4:+:17658932..17660564
Molecular Weight (calculated) 44936.30 Da
IEP (calculated) 8.71
GRAVY (calculated) -0.15
Length 403 amino acids
Sequence (TAIR10)
(BLAST)
001: MTVVREYDPT RDLVGVEDVE RRCEVGPSGK LSLFTDLLGD PICRIRHSPS YLMLVAEMGT EKKEIVGMIR GCIKTVTCGQ KLDLNHKSQN DVVKPLYTKL
101: AYVLGLRVSP FHRRQGIGFK LVKMMEEWFR QNGAEYSYIA TENDNQASVN LFTGKCGYSE FRTPSILVNP VYAHRVNVSR RVTVIKLEPV DAETLYRIRF
201: STTEFFPRDI DSVLNNKLSL GTFVAVPRGS CYGSGSGSWP GSAKFLEYPP ESWAVLSVWN CKDSFLLEVR GASRLRRVVA KTTRVVDKTL PFLKLPSIPS
301: VFEPFGLHFM YGIGGEGPRA VKMVKSLCAH AHNLAKAGGC GVVAAEVAGE DPLRRGIPHW KVLSCDEDLW CIKRLGDDYS DGVVGDWTKS PPGVSIFVDP
401: REF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)