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AT4G37470.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.856
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G03990.1); Has 8593 Blast hits to 8591 proteins in 1653 species: Archae - 86; Bacteria - 6869; Metazoa - 120; Fungi - 103; Plants - 302; Viruses - 19; Other Eukaryotes - 1094 (source: NCBI BLink).
Protein Annotations
BioGrid:15183eggNOG:COG0596eggNOG:ENOG410IM0CEMBL:AL035601EMBL:AL161591EMBL:AY056190EMBL:AY091347
EMBL:CP002687EnsemblPlants:AT4G37470EnsemblPlants:AT4G37470.1entrez:829902ESTHER:arath-KAI2.D14LGene3D:3.40.50.1820GeneID:829902
Genevisible:Q9SZU7GO:GO:0005634GO:GO:0005829GO:GO:0009640GO:GO:0009704GO:GO:0016787GO:GO:0080167
Gramene:AT4G37470.1hmmpanther:PTHR10992hmmpanther:PTHR10992:SF776HOGENOM:HOG000251386InParanoid:Q9SZU7InterPro:IPR000073InterPro:IPR029058
KEGG:ath:AT4G37470MEROPS:S33.A29OMA:MEKNYIGPaxDb:Q9SZU7PDB:3W06PDB:4HRXPDB:4HRY
PDB:4HTAPDB:4IH1PDB:4JYMPDB:4JYPPDBsum:3W06PDBsum:4HRXPDBsum:4HRY
PDBsum:4HTAPDBsum:4IH1PDBsum:4JYMPDBsum:4JYPPfam:PF12697Pfam:Q9SZU7PhylomeDB:Q9SZU7
PIR:T04741PRIDE:Q9SZU7PRO:PR:Q9SZU7ProteinModelPortal:Q9SZU7Proteomes:UP000006548RefSeq:NP_195463.1SMR:Q9SZU7
STRING:3702.AT4G37470.1SUPFAM:SSF53474TAIR:AT4G37470UniGene:At.66602UniGene:At.71877UniGene:At.72976UniGene:At.74782
UniProt:Q9SZU7
Coordinates (TAIR10) chr4:-:17617045..17618363
Molecular Weight (calculated) 29792.70 Da
IEP (calculated) 4.43
GRAVY (calculated) 0.19
Length 270 amino acids
Sequence (TAIR10)
(BLAST)
001: MGVVEEAHNV KVIGSGEATI VLGHGFGTDQ SVWKHLVPHL VDDYRVVLYD NMGAGTTNPD YFDFDRYSNL EGYSFDLIAI LEDLKIESCI FVGHSVSAMI
101: GVLASLNRPD LFSKIVMISA SPRYVNDVDY QGGFEQEDLN QLFEAIRSNY KAWCLGFAPL AVGGDMDSIA VQEFSRTLFN MRPDIALSVG QTIFQSDMRQ
201: ILPFVTVPCH ILQSVKDLAV PVVVSEYLHA NLGCESVVEV IPSDGHLPQL SSPDSVIPVI LRHIRNDIAM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)