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AT4G37370.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:22923678 (2012): endoplasmic reticulum
  • PMID:17317660 (2007): plasma membrane
  • PMID:16618929 (2006): endoplasmic reticulum
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 81, subfamily D, polypeptide 8
Curator
Summary (TAIR10)
member of CYP81D
Computational
Description (TAIR10)
cytochrome P450, family 81, subfamily D, polypeptide 8 (CYP81D8); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to karrikin; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 3 (TAIR:AT4G37340.1); Has 35915 Blast hits to 35767 proteins in 1837 species: Archae - 61; Bacteria - 5629; Metazoa - 11821; Fungi - 7460; Plants - 9456; Viruses - 3; Other Eukaryotes - 1485 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G37370-MONOMEReggNOG:COG2124eggNOG:KOG0156EMBL:AL035601EMBL:AL161591EMBL:AY065192EMBL:BT000090
EMBL:CP002687EnsemblPlants:AT4G37370EnsemblPlants:AT4G37370.1entrez:829891Gene3D:1.10.630.10GeneID:829891GO:GO:0005506
GO:GO:0005783GO:GO:0005886GO:GO:0016021GO:GO:0016709GO:GO:0020037GO:GO:0042343GO:GO:0044550
GO:GO:0080167GO:GO:0098542Gramene:AT4G37370.1hmmpanther:PTHR24298hmmpanther:PTHR24298:SF61HOGENOM:HOG000218627InterPro:IPR001128
InterPro:IPR002401InterPro:IPR017972KEGG:ath:AT4G37370KO:K00517OMA:VNSSHSIPfam:PF00067PhylomeDB:Q9SZT7
PIR:T04731PRINTS:PR00385PRINTS:PR00463PROSITE:PS00086Proteomes:UP000006548RefSeq:NP_195453.1scanprosite:PS00086
SMR:Q9SZT7STRING:3702.AT4G37370.1SUPFAM:SSF48264SwissPalm:Q9SZT7TAIR:AT4G37370tair10-symbols:CYP81D8TMHMM:TMhelix
UniGene:At.27636UniProt:Q9SZT7
Coordinates (TAIR10) chr4:-:17569971..17571678
Molecular Weight (calculated) 56201.50 Da
IEP (calculated) 8.73
GRAVY (calculated) -0.15
Length 497 amino acids
Sequence (TAIR10)
(BLAST)
001: METKTLIFSI LFVVLSLIYL IGKLKRKPNL PPSPAWSLPV IGHLRLLKPP IHRTFLSLSQ SLNNAPIFSL RLGNRLVFVN SSHSIAEECF TKNDVVLANR
101: PNFILAKHVA YDYTTMIAAS YGDHWRNLRR IGSVEIFSNH RLNSFLSIRK DEIRRLVFRL SRNFSQEFVK VDMKSMLSDL TFNNILRMVA GKRYYGDGVE
201: DDPEAKRVRQ LIADVVACAG AGNAVDYLPV LRLVSDYETR VKKLAGRLDE FLQGLVDEKR EAKEKGNTMI DHLLTLQESQ PDYFTDRIIK GNMLALILAG
301: TDTSAVTLEW ALSNVLNHPD VLNKARDEID RKIGLDRLMD ESDISNLPYL QNIVSETLRL YPAAPMLLPH VASEDCKVAG YDMPRGTILL TNVWAIHRDP
401: QLWDDPMSFK PERFEKEGEA QKLMPFGLGR RACPGSGLAH RLINLTLGSL IQCLEWEKIG EEVDMSEGKG VTMPKAKPLE AMCRARPSVV KIFNESV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)