AT4G37370.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 81, subfamily D, polypeptide 8 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP81D | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 81, subfamily D, polypeptide 8 (CYP81D8); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to karrikin; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 3 (TAIR:AT4G37340.1); Has 35915 Blast hits to 35767 proteins in 1837 species: Archae - 61; Bacteria - 5629; Metazoa - 11821; Fungi - 7460; Plants - 9456; Viruses - 3; Other Eukaryotes - 1485 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:17569971..17571678 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 56201.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.73 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.15 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 497 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: METKTLIFSI LFVVLSLIYL IGKLKRKPNL PPSPAWSLPV IGHLRLLKPP IHRTFLSLSQ SLNNAPIFSL RLGNRLVFVN SSHSIAEECF TKNDVVLANR 101: PNFILAKHVA YDYTTMIAAS YGDHWRNLRR IGSVEIFSNH RLNSFLSIRK DEIRRLVFRL SRNFSQEFVK VDMKSMLSDL TFNNILRMVA GKRYYGDGVE 201: DDPEAKRVRQ LIADVVACAG AGNAVDYLPV LRLVSDYETR VKKLAGRLDE FLQGLVDEKR EAKEKGNTMI DHLLTLQESQ PDYFTDRIIK GNMLALILAG 301: TDTSAVTLEW ALSNVLNHPD VLNKARDEID RKIGLDRLMD ESDISNLPYL QNIVSETLRL YPAAPMLLPH VASEDCKVAG YDMPRGTILL TNVWAIHRDP 401: QLWDDPMSFK PERFEKEGEA QKLMPFGLGR RACPGSGLAH RLINLTLGSL IQCLEWEKIG EEVDMSEGKG VTMPKAKPLE AMCRARPSVV KIFNESV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)