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AT4G37295.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.997
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JTS3eggNOG:ENOG41107K7EMBL:AY086629EMBL:BT024803EMBL:CP002687EnsemblPlants:AT4G37295EnsemblPlants:AT4G37295.1
entrez:829884GeneID:829884Gramene:AT4G37295.1HOGENOM:HOG000148662KEGG:ath:AT4G37295OMA:GVVIHGYProteomes:UP000006548
RefSeq:NP_568023.1TAIR:AT4G37295UniGene:At.31258UniProt:Q8LCF5
Coordinates (TAIR10) chr4:+:17553628..17553888
Molecular Weight (calculated) 9414.43 Da
IEP (calculated) 9.37
GRAVY (calculated) -0.08
Length 86 amino acids
Sequence (TAIR10)
(BLAST)
1: MRPVGLIFTV MFLVSAFSES RTADCRVLLG GSTEEIDQSK IHGVDLRSED LLGVVIHGYK KLRWLSSAGE RMHTMASGPS RRGAGH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)